Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221657

Identifier: 78221657

GI number: 78221657

Start: 481923

End: 482216

Strand: Direct

Name: 78221657

Synonym: Gmet_0436

Alternate gene names: NA

Gene position: 481923-482216 (Clockwise)

Preceding gene: 78221656

Following gene: 78221658

Centisome position: 12.06

GC content: 63.95

Gene sequence:

>294_bases
ATGACTGCAATCAACGATATTGTATCCCTTTCCAGCACCGCCGCCATGCGTCCTGCAACCGGGGAGAAGCAGGCCAAGCC
TGTGCAGGCTCCCGCCGCCGGAACGGTCCAGTCCTCCGACCGGGTTGAGCTTTCCCTCGGCAAGGTGCAGGTGGAGCGGC
TGAAGGAGATCGCTCCGGCGGAAGAAACCGTTCGCACCGACCGGGTTGCTGCCTTGAAACAGCAGGTGGCCGGCGGCTCC
TACACGGTCGACAGCAGGCTTGTGGCCGGCAAGATGCTGGCCCTGTTCCGCTAG

Upstream 100 bases:

>100_bases
GAATCGGGCTTGCCTCCATGATCGAGAAGCAGCTTGTGCGGGAGGCGGCGCCCCGCGGCGAAAAAACGCCGGTTACGGTT
TTGAAAGGTAGAGAGAAGAA

Downstream 100 bases:

>100_bases
GACGACGGAGGAGACGAATGTCACAAGGAATGACGAATCTGGCGGATGTGCTCCACGCCCGCAGGGCGAGCATGGAGGAA
ATGATCCGGCTTCTGGCGGA

Product: anti-sigma-28 factor, FlgM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTAINDIVSLSSTAAMRPATGEKQAKPVQAPAAGTVQSSDRVELSLGKVQVERLKEIAPAEETVRTDRVAALKQQVAGGS
YTVDSRLVAGKMLALFR

Sequences:

>Translated_97_residues
MTAINDIVSLSSTAAMRPATGEKQAKPVQAPAAGTVQSSDRVELSLGKVQVERLKEIAPAEETVRTDRVAALKQQVAGGS
YTVDSRLVAGKMLALFR
>Mature_96_residues
TAINDIVSLSSTAAMRPATGEKQAKPVQAPAAGTVQSSDRVELSLGKVQVERLKEIAPAEETVRTDRVAALKQQVAGGSY
TVDSRLVAGKMLALFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10239; Mature: 10108

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAINDIVSLSSTAAMRPATGEKQAKPVQAPAAGTVQSSDRVELSLGKVQVERLKEIAPA
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC
EETVRTDRVAALKQQVAGGSYTVDSRLVAGKMLALFR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAINDIVSLSSTAAMRPATGEKQAKPVQAPAAGTVQSSDRVELSLGKVQVERLKEIAPA
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC
EETVRTDRVAALKQQVAGGSYTVDSRLVAGKMLALFR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA