| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is flgJ [C]
Identifier: 78221656
GI number: 78221656
Start: 481561
End: 481926
Strand: Direct
Name: flgJ [C]
Synonym: Gmet_0435
Alternate gene names: 78221656
Gene position: 481561-481926 (Clockwise)
Preceding gene: 78221655
Following gene: 78221657
Centisome position: 12.05
GC content: 61.48
Gene sequence:
>366_bases ATGCAGACCTCCATTTCTCCCGATACCCTCGTTCAGGAGAGCGATGCCTCCCGCGCCCGGCAACTGGCGGCCCGGAAAGA CAACGCCAAGGCTGCCCGTAAGGTGGCCCAGGAGTTCGAGGCCATGTTCGTCGGCATGATGCTCAAGTCGATGCGCGAGA CCGTGGGGAAAGACAAGCTCACCGGCGGCGGCAAGGGGGAAGAGATGTTCCAGTCGATGCTCGACCAGGAGTACTCCACC GCCATTGCCACGAGCCAGGGGGGAATCGGGCTTGCCTCCATGATCGAGAAGCAGCTTGTGCGGGAGGCGGCGCCCCGCGG CGAAAAAACGCCGGTTACGGTTTTGAAAGGTAGAGAGAAGAAATGA
Upstream 100 bases:
>100_bases CCGGTCCCTGGTCCCGGTCTGTTTGGCATGCAACATGCTGCATACCAAACAGACTTGATTTTTTGCTCAAGTTTTCACGG TTTTTGTCGAAAGGAAGAGT
Downstream 100 bases:
>100_bases CTGCAATCAACGATATTGTATCCCTTTCCAGCACCGCCGCCATGCGTCCTGCAACCGGGGAGAAGCAGGCCAAGCCTGTG CAGGCTCCCGCCGCCGGAAC
Product: flagellar protein FlgJ-like protein
Products: NA
Alternate protein names: Flagellar Protein FlgJ
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MQTSISPDTLVQESDASRARQLAARKDNAKAARKVAQEFEAMFVGMMLKSMRETVGKDKLTGGGKGEEMFQSMLDQEYST AIATSQGGIGLASMIEKQLVREAAPRGEKTPVTVLKGREKK
Sequences:
>Translated_121_residues MQTSISPDTLVQESDASRARQLAARKDNAKAARKVAQEFEAMFVGMMLKSMRETVGKDKLTGGGKGEEMFQSMLDQEYST AIATSQGGIGLASMIEKQLVREAAPRGEKTPVTVLKGREKK >Mature_121_residues MQTSISPDTLVQESDASRARQLAARKDNAKAARKVAQEFEAMFVGMMLKSMRETVGKDKLTGGGKGEEMFQSMLDQEYST AIATSQGGIGLASMIEKQLVREAAPRGEKTPVTVLKGREKK
Specific function: Flagellum-Specific Muramidase Which Hydrolyzes The Peptidoglycan Layer To Assemble The Rod Structure In The Periplasmic Space (By Similarity). [C]
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 13153; Mature: 13153
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSISPDTLVQESDASRARQLAARKDNAKAARKVAQEFEAMFVGMMLKSMRETVGKDKL CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGGGKGEEMFQSMLDQEYSTAIATSQGGIGLASMIEKQLVREAAPRGEKTPVTVLKGREK CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC K C >Mature Secondary Structure MQTSISPDTLVQESDASRARQLAARKDNAKAARKVAQEFEAMFVGMMLKSMRETVGKDKL CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGGGKGEEMFQSMLDQEYSTAIATSQGGIGLASMIEKQLVREAAPRGEKTPVTVLKGREK CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA