The gene/protein map for NC_010501 is currently unavailable.
Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is gdhII [H]

Identifier: 78221643

GI number: 78221643

Start: 469092

End: 469871

Strand: Reverse

Name: gdhII [H]

Synonym: Gmet_0422

Alternate gene names: 78221643

Gene position: 469871-469092 (Counterclockwise)

Preceding gene: 78221668

Following gene: 78221642

Centisome position: 11.75

GC content: 64.87

Gene sequence:

>780_bases
ATGAGTCTCAAGGGAAAGACAGCGATCGTAACCGGCGCCGGCCGAGGTCTCGGCCGCGCTTCCGCCATGGCGCTGGCGCG
TGAGGGGGCTGATCTGGTGATCTTGAGCAGAACCCCCAAGGAACTGGAGGAGACCGCGACGCTCGTCATGGAAGCGGGGG
GAACGGTGGTGATCCAGGAGGGTGACGTGGCGAACCCCGCGGACGTCCGGCGGGTGGTAGGGACCGCGGTCGAGACGTTC
GAATCGGTCGACATCCTCATGAACAATGCGGCAGTCATCGGCCCGGTCCGCGCCCTCCATCAGCTGGCCCCGGAGGAGTG
GGCGTACGCCATGGCCGTCAACCTGACCGGCCCCTGGCTCTTTGCCCGGGAGGTCATCCCCCACATGATCCGCCAGAAGC
GGGGGAAAATCATCAACGTCATCTCGGGGCTGGGCGAAATCGTCATCTCACCCTTCGGGGCCTATGCCATCGCCAAGGCG
GGGCTCATCCACATGACGCGCTACCTGGCCGAGGAGTTGAAGGTCCACAACATCCAGGTGAACGGCCTCGACCCGGCGGT
GATGGACACCCGGATGCAGGAGGATATCCGCGGCCTCGGGCCGGCGGTTCTTGGTCCCGATGTCTTCGCCGACTTCACGG
CCATGAAGGATCGGAAAGAGCTCCTCCCGCCCGAACGGGTGGCGCGACTGGCGGTCTTTCTCGCCTCGGCGGAGTCTGAC
CGGGTAACGGGAGAAAACGGAACCGTGAGCCATTTCCGCACGTTCGGCTACCGGTATTAG

Upstream 100 bases:

>100_bases
CATTCCTCTGTGCGCCCGGGAATTATTGGCGAAATCGGGTAAAATGGTAAAAAACGACCGGAAGCGATCCGCTGTCGGTC
ACGGCTGCAGGGAGGTGGCG

Downstream 100 bases:

>100_bases
GTAGGGAAACAAAAACACGAAGGATGCGGGTAATGGCCGCACAGGAGGTAACGCCCCATGAAACCGACCGAAGGGATGCT
GAGACGAATAGAAGCCGCCT

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: GLCDH-II [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSLKGKTAIVTGAGRGLGRASAMALAREGADLVILSRTPKELEETATLVMEAGGTVVIQEGDVANPADVRRVVGTAVETF
ESVDILMNNAAVIGPVRALHQLAPEEWAYAMAVNLTGPWLFAREVIPHMIRQKRGKIINVISGLGEIVISPFGAYAIAKA
GLIHMTRYLAEELKVHNIQVNGLDPAVMDTRMQEDIRGLGPAVLGPDVFADFTAMKDRKELLPPERVARLAVFLASAESD
RVTGENGTVSHFRTFGYRY

Sequences:

>Translated_259_residues
MSLKGKTAIVTGAGRGLGRASAMALAREGADLVILSRTPKELEETATLVMEAGGTVVIQEGDVANPADVRRVVGTAVETF
ESVDILMNNAAVIGPVRALHQLAPEEWAYAMAVNLTGPWLFAREVIPHMIRQKRGKIINVISGLGEIVISPFGAYAIAKA
GLIHMTRYLAEELKVHNIQVNGLDPAVMDTRMQEDIRGLGPAVLGPDVFADFTAMKDRKELLPPERVARLAVFLASAESD
RVTGENGTVSHFRTFGYRY
>Mature_258_residues
SLKGKTAIVTGAGRGLGRASAMALAREGADLVILSRTPKELEETATLVMEAGGTVVIQEGDVANPADVRRVVGTAVETFE
SVDILMNNAAVIGPVRALHQLAPEEWAYAMAVNLTGPWLFAREVIPHMIRQKRGKIINVISGLGEIVISPFGAYAIAKAG
LIHMTRYLAEELKVHNIQVNGLDPAVMDTRMQEDIRGLGPAVLGPDVFADFTAMKDRKELLPPERVARLAVFLASAESDR
VTGENGTVSHFRTFGYRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=29.0836653386454, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=28.1746031746032, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI4504505, Length=256, Percent_Identity=30.859375, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=29.2490118577075, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=30.2564102564103, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=25.2830188679245, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI40254986, Length=210, Percent_Identity=31.9047619047619, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI4557649, Length=192, Percent_Identity=28.6458333333333, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI40254992, Length=192, Percent_Identity=31.25, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI66933014, Length=244, Percent_Identity=28.2786885245902, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI7705925, Length=195, Percent_Identity=31.7948717948718, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=30.0813008130081, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=192, Percent_Identity=26.5625, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI226371731, Length=193, Percent_Identity=29.0155440414508, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=27.8008298755187, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=25.0980392156863, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI225579078, Length=257, Percent_Identity=26.8482490272374, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI31542939, Length=213, Percent_Identity=29.1079812206573, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI20149619, Length=254, Percent_Identity=24.0157480314961, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=32.2834645669291, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=34.412955465587, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=32.2448979591837, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=31.8897637795276, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=31.1023622047244, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786812, Length=268, Percent_Identity=27.6119402985075, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=31.1740890688259, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787526, Length=245, Percent_Identity=24.0816326530612, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=26.3374485596708, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI2367175, Length=192, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=25.5555555555556, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=256, Percent_Identity=30.078125, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=248, Percent_Identity=30.6451612903226, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=249, Percent_Identity=31.3253012048193, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=31.0756972111554, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=210, Percent_Identity=29.0476190476191, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=249, Percent_Identity=30.9236947791165, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=252, Percent_Identity=30.1587301587302, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=246, Percent_Identity=29.6747967479675, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=26.4822134387352, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=246, Percent_Identity=31.7073170731707, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562906, Length=250, Percent_Identity=29.6, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=279, Percent_Identity=29.3906810035842, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=27.6264591439689, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.0204081632653, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=206, Percent_Identity=27.6699029126214, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=250, Percent_Identity=28.4, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=248, Percent_Identity=29.8387096774194, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=251, Percent_Identity=27.4900398406374, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=30.0813008130081, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86565303, Length=212, Percent_Identity=33.9622641509434, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982365, Length=190, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=28.7449392712551, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=206, Percent_Identity=30.5825242718447, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=253, Percent_Identity=29.6442687747036, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=29.0697674418605, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17559552, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=255, Percent_Identity=28.6274509803922, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25152911, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=27.7992277992278, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555612, Length=233, Percent_Identity=29.6137339055794, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558006, Length=211, Percent_Identity=25.5924170616114, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=240, Percent_Identity=25.4166666666667, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=31.5175097276265, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI212646214, Length=192, Percent_Identity=25.5208333333333, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17557668, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6322226, Length=239, Percent_Identity=28.0334728033473, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=251, Percent_Identity=25.8964143426295, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=32.2834645669291, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=31.0483870967742, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=31.8367346938775, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=28.8617886178862, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=30.241935483871, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24644339, Length=196, Percent_Identity=29.5918367346939, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18859837, Length=203, Percent_Identity=33.4975369458128, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161076933, Length=193, Percent_Identity=30.5699481865285, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24584748, Length=193, Percent_Identity=30.5699481865285, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355631, Length=176, Percent_Identity=28.9772727272727, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649181, Length=217, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24647946, Length=212, Percent_Identity=25.9433962264151, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45553409, Length=212, Percent_Identity=25.9433962264151, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24647948, Length=212, Percent_Identity=25.9433962264151, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24586328, Length=261, Percent_Identity=27.9693486590038, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24643142, Length=213, Percent_Identity=29.1079812206573, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076371, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=27.6041666666667, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574402, Length=191, Percent_Identity=27.7486910994764, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.47 [H]

Molecular weight: Translated: 27947; Mature: 27816

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSLKGKTAIVTGAGRGLGRASAMALAREGADLVILSRTPKELEETATLVMEAGGTVVIQE
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEC
GDVANPADVRRVVGTAVETFESVDILMNNAAVIGPVRALHQLAPEEWAYAMAVNLTGPWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHEEEEEEECCCCHH
FAREVIPHMIRQKRGKIINVISGLGEIVISPFGAYAIAKAGLIHMTRYLAEELKVHNIQV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
NGLDPAVMDTRMQEDIRGLGPAVLGPDVFADFTAMKDRKELLPPERVARLAVFLASAESD
CCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RVTGENGTVSHFRTFGYRY
CCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SLKGKTAIVTGAGRGLGRASAMALAREGADLVILSRTPKELEETATLVMEAGGTVVIQE
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEC
GDVANPADVRRVVGTAVETFESVDILMNNAAVIGPVRALHQLAPEEWAYAMAVNLTGPWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHEEEEEEECCCCHH
FAREVIPHMIRQKRGKIINVISGLGEIVISPFGAYAIAKAGLIHMTRYLAEELKVHNIQV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
NGLDPAVMDTRMQEDIRGLGPAVLGPDVFADFTAMKDRKELLPPERVARLAVFLASAESD
CCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RVTGENGTVSHFRTFGYRY
CCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA