| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221570
Identifier: 78221570
GI number: 78221570
Start: 388324
End: 389172
Strand: Direct
Name: 78221570
Synonym: Gmet_0349
Alternate gene names: NA
Gene position: 388324-389172 (Clockwise)
Preceding gene: 78221569
Following gene: 78221572
Centisome position: 9.71
GC content: 62.78
Gene sequence:
>849_bases GTGAAGCGTTTCGGCAGGTTCGCCGGCATCGCCCTCGTTTTGGTTGTGGCTGCCCTGACGGCTCGGAGCTGCTTCAGCCA CGACCTCATCGTGCGGCTGTCGGACCGCAAAGAGATCAGCTTTAAGCAGATGATGGGGGATTTGCGGAAGGTTGCGGTGA TTTACGTGGGAGAGGTTCACGACAATCCCGATCACCACGTGCTGCAGCTGCGGATCATCCGGGGACTGCACCGGGCCGGG GTTCCGCTGGCCATCGGCATGGAGATGTTTACCGCCGGGAGCCAGCAGGAGCTCGACCGGTGGGTGGCGGGGCAGACCGG CACGGCCGCGTTTCAGCGGATCTACCGCAGGGAGTGGAACCTGCCGTGGTCCCTCTATGGCGACATCCTTCTCTTTGCCC GTGACAAGCGGATTCCCCTCATCGGTCTCAACGTCCCCCGGGACATTACCCGCAAGGTGGGCCGGGAGGGATTCGCTTCC CTGACGGAGGATGAGCGGCGGAAGCTTCCCCCCAACATCACCTGCGACGTGGATGAGAGCTACATGGCCATGATTCACCG CTCCTACTCAAGCCACGGCCTCAGCGCCAACACCTTCAGGAACTTCTGCGAAGCCCAGATGCTCTGGAACAAGTCCATGG CCTACCACATGGTGGAATATCTCAGGAAGAATCCGGGGCGGACCGTGGTGGTCATCACGGGAGGAGGCCATGCCATCAGG GGGGGAATGCCGGTTCAGGTGGACCGGGAGAGGCCCGGCCTCTCCAGCCGGGTGGTTCTGCCCGACCCGGTGGTCCGCAA CGGCCGGATTAAGGCGGAGGAAGCCGATTACCTCTGGCTTTCCCACTGA
Upstream 100 bases:
>100_bases GGGAGAACCGGGTCAAGGAGACCTCGCGTCCTCCGGGCGGCGGGAGCATCGTGAGATTCGCCCGGTGAGAGGCAACGGTG CCGGCGTTGGGGGAGGAGTC
Downstream 100 bases:
>100_bases AGGGATTACTTCATTCTCGGCAGGGAGACGAAGAAGGTGCTTCCGGCGTCGGGAGTGCTCTCCACCCACACCCGCCCGCC GTGGGCCGCCACGATTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKRFGRFAGIALVLVVAALTARSCFSHDLIVRLSDRKEISFKQMMGDLRKVAVIYVGEVHDNPDHHVLQLRIIRGLHRAG VPLAIGMEMFTAGSQQELDRWVAGQTGTAAFQRIYRREWNLPWSLYGDILLFARDKRIPLIGLNVPRDITRKVGREGFAS LTEDERRKLPPNITCDVDESYMAMIHRSYSSHGLSANTFRNFCEAQMLWNKSMAYHMVEYLRKNPGRTVVVITGGGHAIR GGMPVQVDRERPGLSSRVVLPDPVVRNGRIKAEEADYLWLSH
Sequences:
>Translated_282_residues MKRFGRFAGIALVLVVAALTARSCFSHDLIVRLSDRKEISFKQMMGDLRKVAVIYVGEVHDNPDHHVLQLRIIRGLHRAG VPLAIGMEMFTAGSQQELDRWVAGQTGTAAFQRIYRREWNLPWSLYGDILLFARDKRIPLIGLNVPRDITRKVGREGFAS LTEDERRKLPPNITCDVDESYMAMIHRSYSSHGLSANTFRNFCEAQMLWNKSMAYHMVEYLRKNPGRTVVVITGGGHAIR GGMPVQVDRERPGLSSRVVLPDPVVRNGRIKAEEADYLWLSH >Mature_282_residues MKRFGRFAGIALVLVVAALTARSCFSHDLIVRLSDRKEISFKQMMGDLRKVAVIYVGEVHDNPDHHVLQLRIIRGLHRAG VPLAIGMEMFTAGSQQELDRWVAGQTGTAAFQRIYRREWNLPWSLYGDILLFARDKRIPLIGLNVPRDITRKVGREGFAS LTEDERRKLPPNITCDVDESYMAMIHRSYSSHGLSANTFRNFCEAQMLWNKSMAYHMVEYLRKNPGRTVVVITGGGHAIR GGMPVQVDRERPGLSSRVVLPDPVVRNGRIKAEEADYLWLSH
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32024; Mature: 32024
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFGRFAGIALVLVVAALTARSCFSHDLIVRLSDRKEISFKQMMGDLRKVAVIYVGEVH CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEEECCC DNPDHHVLQLRIIRGLHRAGVPLAIGMEMFTAGSQQELDRWVAGQTGTAAFQRIYRREWN CCCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC LPWSLYGDILLFARDKRIPLIGLNVPRDITRKVGREGFASLTEDERRKLPPNITCDVDES CCHHHHCCEEEEEECCCCCEEECCCCHHHHHHHCHHHHHHCCCHHHHCCCCCCEECCCHH YMAMIHRSYSSHGLSANTFRNFCEAQMLWNKSMAYHMVEYLRKNPGRTVVVITGGGHAIR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE GGMPVQVDRERPGLSSRVVLPDPVVRNGRIKAEEADYLWLSH CCCCEEECCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECC >Mature Secondary Structure MKRFGRFAGIALVLVVAALTARSCFSHDLIVRLSDRKEISFKQMMGDLRKVAVIYVGEVH CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEEECCC DNPDHHVLQLRIIRGLHRAGVPLAIGMEMFTAGSQQELDRWVAGQTGTAAFQRIYRREWN CCCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC LPWSLYGDILLFARDKRIPLIGLNVPRDITRKVGREGFASLTEDERRKLPPNITCDVDES CCHHHHCCEEEEEECCCCCEEECCCCHHHHHHHCHHHHHHCCCHHHHCCCCCCEECCCHH YMAMIHRSYSSHGLSANTFRNFCEAQMLWNKSMAYHMVEYLRKNPGRTVVVITGGGHAIR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE GGMPVQVDRERPGLSSRVVLPDPVVRNGRIKAEEADYLWLSH CCCCEEECCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA