| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221543
Identifier: 78221543
GI number: 78221543
Start: 359191
End: 359997
Strand: Reverse
Name: 78221543
Synonym: Gmet_0322
Alternate gene names: NA
Gene position: 359997-359191 (Counterclockwise)
Preceding gene: 78221545
Following gene: 78221542
Centisome position: 9.01
GC content: 44.86
Gene sequence:
>807_bases TTGGGGAACCATCAAGATACCGCAGTGCTGCCGTTGTTGTTTATTAATCTTCCCCGGAATTCCCTGAAGAACCAAAATTT AACGGAGGTCCAAATGAAGAATCTTAGTTTTTGTTGTTTGCTTGCATGTGTGCTTTTGACAATTCTGTGCGGATGTGCAA ACCCACGCCAGGTAATGGTAAATCCCAACACGTGGCAACAAACTGTATGTGCATCAAGTGGGTGGGGCTGGTTGGGAGCA CCTTTAGCTTACAAGAACTATAACAACTGCGTAAATAATCAAAAAGTATTGGGGCTTATCCCACTAGAGGAATTAGAAGC TAAGGACACTCCTAGATTTGATACACTCATTGATGCAACCGACAAGAAGGCAGCGCGACCAGAATGGCAGGCTGGGCAAT TTTGGGAGTATTCATTAAGCAGTGGCGGAACTAGCCGACTTACCGTGCAGAAAATCGGGAGTTATAATGGAACCGCAGGT TACAATGTTTTTAATGCTAATGGCAGAGAATCTTTTTATGACCAGTCTCTTGGTCTCATGATTGTCTTTGGTAGTGGTGG TGTTGAAACTGAATACGATCCAGCCCTACGCCCTTTCGACTTCCCGCTCTTCTTGAGCAAAAGTTGGAATGCCACTGGCG ATATGCACCGCTCAGGTGGTCACATTGATCTTTCAAACCACCATGAGGTTAAAGGATATGGACGGATCAAAGTGCCTGCT GGTGAATTTGATGCTTTTTATATTTTGAACAGAAGCGACTATGGCGCGAGAATCAGCGAACTCTGGTACAGCCCGGAAGT TAAATAG
Upstream 100 bases:
>100_bases ACGATAGTGCGTGCCCCAGCAACACGATATCCTTCCCACCCTCCCGCAATTGCGATAACATCGGAATACGACAACGGCAG CCTCCTGCGATCTTTTTTGG
Downstream 100 bases:
>100_bases TCGTCCCTGAAAAAGTCCCCAAACGGTCTCAGTTGGTCTGAAACCGGCAGGGTAAGCACTCCAGCAAGGGCATCAGGTTC AGATCGATGCCCCTGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MGNHQDTAVLPLLFINLPRNSLKNQNLTEVQMKNLSFCCLLACVLLTILCGCANPRQVMVNPNTWQQTVCASSGWGWLGA PLAYKNYNNCVNNQKVLGLIPLEELEAKDTPRFDTLIDATDKKAARPEWQAGQFWEYSLSSGGTSRLTVQKIGSYNGTAG YNVFNANGRESFYDQSLGLMIVFGSGGVETEYDPALRPFDFPLFLSKSWNATGDMHRSGGHIDLSNHHEVKGYGRIKVPA GEFDAFYILNRSDYGARISELWYSPEVK
Sequences:
>Translated_268_residues MGNHQDTAVLPLLFINLPRNSLKNQNLTEVQMKNLSFCCLLACVLLTILCGCANPRQVMVNPNTWQQTVCASSGWGWLGA PLAYKNYNNCVNNQKVLGLIPLEELEAKDTPRFDTLIDATDKKAARPEWQAGQFWEYSLSSGGTSRLTVQKIGSYNGTAG YNVFNANGRESFYDQSLGLMIVFGSGGVETEYDPALRPFDFPLFLSKSWNATGDMHRSGGHIDLSNHHEVKGYGRIKVPA GEFDAFYILNRSDYGARISELWYSPEVK >Mature_267_residues GNHQDTAVLPLLFINLPRNSLKNQNLTEVQMKNLSFCCLLACVLLTILCGCANPRQVMVNPNTWQQTVCASSGWGWLGAP LAYKNYNNCVNNQKVLGLIPLEELEAKDTPRFDTLIDATDKKAARPEWQAGQFWEYSLSSGGTSRLTVQKIGSYNGTAGY NVFNANGRESFYDQSLGLMIVFGSGGVETEYDPALRPFDFPLFLSKSWNATGDMHRSGGHIDLSNHHEVKGYGRIKVPAG EFDAFYILNRSDYGARISELWYSPEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29848; Mature: 29717
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNHQDTAVLPLLFINLPRNSLKNQNLTEVQMKNLSFCCLLACVLLTILCGCANPRQVMV CCCCCCCEEEEEEEEECCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEE NPNTWQQTVCASSGWGWLGAPLAYKNYNNCVNNQKVLGLIPLEELEAKDTPRFDTLIDAT CCCCHHHHHHCCCCCCCCCCCEEECCCHHHCCCCEEEEEECHHHHCCCCCCCHHHEECCC DKKAARPEWQAGQFWEYSLSSGGTSRLTVQKIGSYNGTAGYNVFNANGRESFYDQSLGLM CCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCEE IVFGSGGVETEYDPALRPFDFPLFLSKSWNATGDMHRSGGHIDLSNHHEVKGYGRIKVPA EEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEECCCEEEEECC GEFDAFYILNRSDYGARISELWYSPEVK CCCCEEEEEECCCCCCHHHHHCCCCCCC >Mature Secondary Structure GNHQDTAVLPLLFINLPRNSLKNQNLTEVQMKNLSFCCLLACVLLTILCGCANPRQVMV CCCCCCEEEEEEEEECCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEE NPNTWQQTVCASSGWGWLGAPLAYKNYNNCVNNQKVLGLIPLEELEAKDTPRFDTLIDAT CCCCHHHHHHCCCCCCCCCCCEEECCCHHHCCCCEEEEEECHHHHCCCCCCCHHHEECCC DKKAARPEWQAGQFWEYSLSSGGTSRLTVQKIGSYNGTAGYNVFNANGRESFYDQSLGLM CCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCEE IVFGSGGVETEYDPALRPFDFPLFLSKSWNATGDMHRSGGHIDLSNHHEVKGYGRIKVPA EEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEECCCEEEEECC GEFDAFYILNRSDYGARISELWYSPEVK CCCCEEEEEECCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA