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The map label for this gene is 78221539

Identifier: 78221539

GI number: 78221539

Start: 354581

End: 354892

Strand: Direct

Name: 78221539

Synonym: Gmet_0317

Alternate gene names: NA

Gene position: 354581-354892 (Clockwise)

Preceding gene: 78221538

Following gene: 78221544

Centisome position: 8.87

GC content: 54.49

Gene sequence:

>312_bases
ATGTCACTCGATGAAAAAGAACTGCTGGCACGCGATGCAAAGAGAAACATTGGCGAAGAACTCCTCCAGGCCGTGCGAGA
CATCAAGGCCGGCAAGGTCGGGCGTGTTTCCACCCTGGAAATTTCTCCAATAGCTGCGGCTCGCCAAAAGATCGGTCTTT
CGCAGAGGGAGTTCGCAAAAATGCTCGGGGTATCGCTCCGCACCCTTCAGGAGTGGGAGCAGGGGCGTCGGACGCCATCC
GGTGCGGCGAAATCTCTCATCACTATTGCCATCAAGAAACCTGAGGTAATCAAAGAACTACTTGCAGCCTGA

Upstream 100 bases:

>100_bases
TCAGAAGCAGGCGAAATCTGGTTGCTACTGATTTACGCCAAGAGCGCTGTTGACAGCATTCCCGGCCATATTCTCAAAGC
ACTCAAAGAGGAGATGGAAC

Downstream 100 bases:

>100_bases
GTCCACAAAGAAAATAGGGGACGGGCTAGTTTTTCCACATGCCTTCATCCCCTCAGCGATTCTTTCCTCGAAAAGTAGCC
TGTCCCTTTTTTTCTTTCCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix XRE Family Protein; Xin-Antitoxin System Antitoxin Component Xre Family; Virulence Gene Repressor RsaL

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSLDEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAKMLGVSLRTLQEWEQGRRTPS
GAAKSLITIAIKKPEVIKELLAA

Sequences:

>Translated_103_residues
MSLDEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAKMLGVSLRTLQEWEQGRRTPS
GAAKSLITIAIKKPEVIKELLAA
>Mature_102_residues
SLDEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAKMLGVSLRTLQEWEQGRRTPSG
AAKSLITIAIKKPEVIKELLAA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11306; Mature: 11175

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCHHHHHH
MLGVSLRTLQEWEQGRRTPSGAAKSLITIAIKKPEVIKELLAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
SLDEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCHHHHHH
MLGVSLRTLQEWEQGRRTPSGAAKSLITIAIKKPEVIKELLAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA