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The map label for this gene is 78221537

Identifier: 78221537

GI number: 78221537

Start: 353732

End: 354085

Strand: Direct

Name: 78221537

Synonym: Gmet_0315

Alternate gene names: NA

Gene position: 353732-354085 (Clockwise)

Preceding gene: 78221534

Following gene: 78221538

Centisome position: 8.85

GC content: 57.91

Gene sequence:

>354_bases
ATGCTCACGCACAAAAAACTTAAAGCCCGTGCGCTCGAACGCCCGGATGTGAAAGCCGAATATGACCGGCTTGACGAGGA
ATTTGCTTTTCTGGACGAATTTCTGAAAGCGCGTGCAGCCGCTGGAGTTACACAGGCGGAAGTTGCCGAACGCATCGGCA
CGACACAGTCTGCTATTGCACGGCTTGAGTCAGGAGGAGGAAAACATTCTCCCTCTCTGGCCACGCTGCAGAAGTACGCA
CACGCCCTCGGCTGCCGTCTGGAGTTGCGGCTCGTCCAAGAGACTAAAGCTCGGGAAATTGAAGGAAGGGCCAGCCGCCC
AAGTCGGGCCGCCACGAAGCGGGTGGCTGGGTAG

Upstream 100 bases:

>100_bases
GGCAAGAAGATCGTGATGCTGCATCAATTCACGAAGAAAACGGACAAGACTCCGCCCAGAGAGCTTGAACTGGCGCGGAG
GAGGATGAAGGAGGTCAAGA

Downstream 100 bases:

>100_bases
CTTCGCAACTGTCAGTGAGAAGGATGGTGTGTTGGCGGCAGAGGTCGTCTCAATGGGGCGTTGTCTATTTGTCAATGACA
CGGAGTTGGCAAACTATTAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Phage-Like Regulator Protein; Transcriptional Regulator CI Family; XRE Family Helix-Turn-Helix Transcriptional Regulator; Bacteriophage

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLTHKKLKARALERPDVKAEYDRLDEEFAFLDEFLKARAAAGVTQAEVAERIGTTQSAIARLESGGGKHSPSLATLQKYA
HALGCRLELRLVQETKAREIEGRASRPSRAATKRVAG

Sequences:

>Translated_117_residues
MLTHKKLKARALERPDVKAEYDRLDEEFAFLDEFLKARAAAGVTQAEVAERIGTTQSAIARLESGGGKHSPSLATLQKYA
HALGCRLELRLVQETKAREIEGRASRPSRAATKRVAG
>Mature_117_residues
MLTHKKLKARALERPDVKAEYDRLDEEFAFLDEFLKARAAAGVTQAEVAERIGTTQSAIARLESGGGKHSPSLATLQKYA
HALGCRLELRLVQETKAREIEGRASRPSRAATKRVAG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12844; Mature: 12844

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHKKLKARALERPDVKAEYDRLDEEFAFLDEFLKARAAAGVTQAEVAERIGTTQSAIA
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
RLESGGGKHSPSLATLQKYAHALGCRLELRLVQETKAREIEGRASRPSRAATKRVAG
HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MLTHKKLKARALERPDVKAEYDRLDEEFAFLDEFLKARAAAGVTQAEVAERIGTTQSAIA
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
RLESGGGKHSPSLATLQKYAHALGCRLELRLVQETKAREIEGRASRPSRAATKRVAG
HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA