| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221536
Identifier: 78221536
GI number: 78221536
Start: 352906
End: 353415
Strand: Reverse
Name: 78221536
Synonym: Gmet_0313
Alternate gene names: NA
Gene position: 353415-352906 (Counterclockwise)
Preceding gene: 78221540
Following gene: 78221535
Centisome position: 8.84
GC content: 59.02
Gene sequence:
>510_bases ATGAAAAAACATAGCACATTTGCTATATTCAATCCAGGCTTTTGTACTATACGCAGCGCGCCTCCTTCCAGCGCAGAATG CCTGAAAACGAAACCAGAGGCCGTCACAGAAAATAATAGAGGGAAGCGGCAGCGTGGAGCCCTTGATGGGCAACAGACAA TTGGGGCACTACTTTCCCATGGGGGGCATGAAAATGCCCACAAGGGGGAGACGGCAAAGGACGGGAAGTCGTGGCTCCTC CTGAAGAAGAAGGACCGTTACGCCACCGGCGAAGACATCCTCGGCGAGAACCGTTCGGTGTTCTCCGGCAGGACCCAGGA GAAGGCGTTCAAAACCGCCCCGGGGAAAGGGTCCGGACAGAAAAGAAGAGAACGGATCCGCCTTCGGGAGGCGCTGGAAA ACCCGGCGCTGAAGGAGGCACCCGCACCCCCCATGCCCCGTGACATCCGGCCGATGCTGGCGACCCCGGCCGAGGCCCCT TCGACCACCCCGATTGGGTCTTCGAGGTGA
Upstream 100 bases:
>100_bases CATGCGGTCGGTATACCGAAGGTACCTACCGAGAAAGCCCGCCGGCATTGTCAGTATTTCCTCTTGAAGCGATTCGCTGT AATAGGTGATCGTCCAAATC
Downstream 100 bases:
>100_bases AATGGGACAGATGCTCCGCTTCTACGCGCAGCGCCTCAACGCGCTGGAGATCAACGACACGTTCTATCACATGCCGGCGG AGAGGGTCCTCGCCCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKKHSTFAIFNPGFCTIRSAPPSSAECLKTKPEAVTENNRGKRQRGALDGQQTIGALLSHGGHENAHKGETAKDGKSWLL LKKKDRYATGEDILGENRSVFSGRTQEKAFKTAPGKGSGQKRRERIRLREALENPALKEAPAPPMPRDIRPMLATPAEAP STTPIGSSR
Sequences:
>Translated_169_residues MKKHSTFAIFNPGFCTIRSAPPSSAECLKTKPEAVTENNRGKRQRGALDGQQTIGALLSHGGHENAHKGETAKDGKSWLL LKKKDRYATGEDILGENRSVFSGRTQEKAFKTAPGKGSGQKRRERIRLREALENPALKEAPAPPMPRDIRPMLATPAEAP STTPIGSSR >Mature_169_residues MKKHSTFAIFNPGFCTIRSAPPSSAECLKTKPEAVTENNRGKRQRGALDGQQTIGALLSHGGHENAHKGETAKDGKSWLL LKKKDRYATGEDILGENRSVFSGRTQEKAFKTAPGKGSGQKRRERIRLREALENPALKEAPAPPMPRDIRPMLATPAEAP STTPIGSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18383; Mature: 18383
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHSTFAIFNPGFCTIRSAPPSSAECLKTKPEAVTENNRGKRQRGALDGQQTIGALLSH CCCCCCEEEECCCEEEEECCCCCCHHHHHCCCCHHCCCCCCCHHHCCCCHHHHHHHHHHC GGHENAHKGETAKDGKSWLLLKKKDRYATGEDILGENRSVFSGRTQEKAFKTAPGKGSGQ CCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCHHCCCCHHHHHHCCCCCCCCH KRRERIRLREALENPALKEAPAPPMPRDIRPMLATPAEAPSTTPIGSSR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKHSTFAIFNPGFCTIRSAPPSSAECLKTKPEAVTENNRGKRQRGALDGQQTIGALLSH CCCCCCEEEECCCEEEEECCCCCCHHHHHCCCCHHCCCCCCCHHHCCCCHHHHHHHHHHC GGHENAHKGETAKDGKSWLLLKKKDRYATGEDILGENRSVFSGRTQEKAFKTAPGKGSGQ CCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCHHCCCCHHHHHHCCCCCCCCH KRRERIRLREALENPALKEAPAPPMPRDIRPMLATPAEAPSTTPIGSSR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA