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The map label for this gene is sucC [H]

Identifier: 78221528

GI number: 78221528

Start: 342923

End: 344194

Strand: Direct

Name: sucC [H]

Synonym: Gmet_0305

Alternate gene names: 78221528

Gene position: 342923-344194 (Clockwise)

Preceding gene: 78221526

Following gene: 78221529

Centisome position: 8.58

GC content: 60.38

Gene sequence:

>1272_bases
ATGCAGTTGACAGGATTAAAGTATGGAAGAAGGCTGCTCGATCTGGTGGAGTTTCCCGTGTCGCAGGTTCTGACAGAGGA
TGCTTCCCACGATGAGATCAATGAGCTGATTGCATCCCATGGCGGCAAGTGTATTGTCAAACCGGTGTTCCTCGGTGGCG
TGGGGAAAAAGGGTAAGGCTGGTCTAGTGCGCATTTGTTCCAATGTCTTTGACGCGATGGTCGCCAAGCGTGACCTCTTC
TTTGCCACCCATCACCAGGGGAACCGCGAGGTGCAGGCCTGTGGCGTGACCTTTGAAGGATACATCGCCTCGGACATCGA
GATCTACGTGAGCATCTCCGAGTCCAGTGAATACCGGATGCCGGTCCTCCTCCTGACCACCAAGGGTGGGGTCGACGTGG
AAGATGTCCCCCCCGAGGACAAGCGGACCATCGTCTTCAACCCGGTCACCGGCGTGAAGTCGTTCCATATCAACGATGCC
CTGCGGGAGCTGAAGTGCCCCCCCCAGTACATCAGTTCCCTCGTTCAGCATCTGCCGAAGCTCTGGCAGGTCTATGACAA
CTACGGCCTCACCACCCTGGAGCTGAACCCCATCCGGATGGGGAAGGTGAAGGGGCGCTACGTCCCCTTCGCCTGCGACA
TCAAGGCCTCCTTCGACCAGGACAACCCGGCCTGGAAACGGCTCGGCTACCCGGAGGAGATCTTCTCCACCACCATCACC
CAGTTCGAGTCGGAGATCAATGTCCTGCGGACCCACCAGGGGCAGAGCGACGTGACGGAGGTGAACCCCAAGGGGACGAT
CCTCCCCTTCATCTTCGGGGGCGGGGCCAACAGCGCTGCCACGGAGATCCTGGCGGACCGGGCCATCATCTCCTCCGACT
TCGGCGGCAACCCCCCCTACGAGAAGATCAGGGCCATTGCCGACATCACCTTCAAGCACTGGCTTCCCCAGGCGAACGTG
GTGCTCCTGATCGGGGGACGGGCCAACAACACCAACATCTTCACCACCTTCAAGGCGATCTTCGATTCGCTTCGGGAGCA
CATCCGCCTGAACCCCGACGTCTTCGTGGTGGCGGGGCGGGGCGGTCCCATGGTGGTGGAGGGGATGGTCTACGGCAGGG
ACGTCCTCGACTCCCTTCGTGTCCCCTACCGCTTCTTCGGCCATGACAGCAGCATGATGAGCGTTCTGCAGCATGCCATC
GAGATCGATTCGTTTCTTGAGCCGAAACCGGTCGCGGTGGCGCCGAAGCAGATCAAGGCCAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGTGGCAGACTGTCAAAATCCGGAAGATTAGTTGGCTGCAGCCGATGCAGCACTATCAAAAGCTGAGCGACGTTAACA
AAGGGCATGAGGAGGTCTCT

Downstream 100 bases:

>100_bases
GCAGCGTCGCGAGACGGAACGACTTCACGAAGGAGATAACCAATGAACTATCAAAATAATCCCTTTCCCTACCACGTCGG
TGTCCAGTCGCTCCACGAGC

Product: ATP citrate lyase subunit 1

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQLTGLKYGRRLLDLVEFPVSQVLTEDASHDEINELIASHGGKCIVKPVFLGGVGKKGKAGLVRICSNVFDAMVAKRDLF
FATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNPVTGVKSFHINDA
LRELKCPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFSTTIT
QFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILADRAIISSDFGGNPPYEKIRAIADITFKHWLPQANV
VLLIGGRANNTNIFTTFKAIFDSLREHIRLNPDVFVVAGRGGPMVVEGMVYGRDVLDSLRVPYRFFGHDSSMMSVLQHAI
EIDSFLEPKPVAVAPKQIKAKAA

Sequences:

>Translated_423_residues
MQLTGLKYGRRLLDLVEFPVSQVLTEDASHDEINELIASHGGKCIVKPVFLGGVGKKGKAGLVRICSNVFDAMVAKRDLF
FATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNPVTGVKSFHINDA
LRELKCPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFSTTIT
QFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILADRAIISSDFGGNPPYEKIRAIADITFKHWLPQANV
VLLIGGRANNTNIFTTFKAIFDSLREHIRLNPDVFVVAGRGGPMVVEGMVYGRDVLDSLRVPYRFFGHDSSMMSVLQHAI
EIDSFLEPKPVAVAPKQIKAKAA
>Mature_423_residues
MQLTGLKYGRRLLDLVEFPVSQVLTEDASHDEINELIASHGGKCIVKPVFLGGVGKKGKAGLVRICSNVFDAMVAKRDLF
FATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNPVTGVKSFHINDA
LRELKCPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFSTTIT
QFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILADRAIISSDFGGNPPYEKIRAIADITFKHWLPQANV
VLLIGGRANNTNIFTTFKAIFDSLREHIRLNPDVFVVAGRGGPMVVEGMVYGRDVLDSLRVPYRFFGHDSSMMSVLQHAI
EIDSFLEPKPVAVAPKQIKAKAA

Specific function: Unknown

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI38569421, Length=320, Percent_Identity=25.625, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI38569423, Length=320, Percent_Identity=25.625, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17557344, Length=410, Percent_Identity=27.3170731707317, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17551266, Length=407, Percent_Identity=26.044226044226, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281363475, Length=317, Percent_Identity=27.1293375394322, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363473, Length=317, Percent_Identity=27.1293375394322, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363477, Length=317, Percent_Identity=27.1293375394322, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR017866
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 46798; Mature: 46798

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTGLKYGRRLLDLVEFPVSQVLTEDASHDEINELIASHGGKCIVKPVFLGGVGKKGKA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCH
GLVRICSNVFDAMVAKRDLFFATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYRM
HHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECEEEECEEECCEEEEEEEECCCCCCC
PVLLLTTKGGVDVEDVPPEDKRTIVFNPVTGVKSFHINDALRELKCPPQYISSLVQHLPK
EEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHH
LWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFSTTIT
HHHHHHCCCEEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHH
QFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILADRAIISSDFGGNPPY
HHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCH
EKIRAIADITFKHWLPQANVVLLIGGRANNTNIFTTFKAIFDSLREHIRLNPDVFVVAGR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECC
GGPMVVEGMVYGRDVLDSLRVPYRFFGHDSSMMSVLQHAIEIDSFLEPKPVAVAPKQIKA
CCCEEEEEEHHCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCHHHHC
KAA
CCC
>Mature Secondary Structure
MQLTGLKYGRRLLDLVEFPVSQVLTEDASHDEINELIASHGGKCIVKPVFLGGVGKKGKA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCH
GLVRICSNVFDAMVAKRDLFFATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYRM
HHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECEEEECEEECCEEEEEEEECCCCCCC
PVLLLTTKGGVDVEDVPPEDKRTIVFNPVTGVKSFHINDALRELKCPPQYISSLVQHLPK
EEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHH
LWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFSTTIT
HHHHHHCCCEEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHH
QFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILADRAIISSDFGGNPPY
HHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCH
EKIRAIADITFKHWLPQANVVLLIGGRANNTNIFTTFKAIFDSLREHIRLNPDVFVVAGR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECC
GGPMVVEGMVYGRDVLDSLRVPYRFFGHDSSMMSVLQHAIEIDSFLEPKPVAVAPKQIKA
CCCEEEEEEHHCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCHHHHC
KAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA