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The map label for this gene is hcpA [H]

Identifier: 78221503

GI number: 78221503

Start: 312033

End: 312518

Strand: Direct

Name: hcpA [H]

Synonym: Gmet_0280

Alternate gene names: 78221503

Gene position: 312033-312518 (Clockwise)

Preceding gene: 78221502

Following gene: 78221504

Centisome position: 7.81

GC content: 57.61

Gene sequence:

>486_bases
ATGGCAATGCCCGCACACCTCACCCTCACCGGTGAAAAACAGGGGAAGATTGACGGTTCCTGTGAACTGCAGGGACGTGA
AAAAACCATCCTCGTCTACTCCATGAATCACGACATCCACATGCCGAAGGATCCCCACTCGGGGCTTCCCACCGGCAAGC
GGGTTCACGGCCCCCTGAGCATCGTAAAGGAGTTCGACGCCAGCTCCCCCAAGATGTACCAGGCCCTCTGCACTGGTGAG
CACCTAAAGGACGTCACCCTCAAGTTCTACCGCATCACCAAGCAGGGGACCGAGGAGCACTACTACACCATCAAGCTCGA
AGACGCCATCGTGGTCAGCATGAAGCCCTACATGCCGGTAACACTCCTGGAGGAGAACAATCCCTACCGCCACATGGAAG
AAGTGGCCTTCACCTACCGCAAGATCAAGTGGACCTGGGAGCCCAACGGCATCGAAGCCGAGGATTCCTGGAGCGTGCCC
AAGTAG

Upstream 100 bases:

>100_bases
ATAAGCTCGTACAGTCGTGAGCGATGAATTCACGGTTTATGTGTTTGCAATACGGCCCATCCCTGGCCGCGTATCCCACA
CCACAAGGAGGAAGTAATCA

Downstream 100 bases:

>100_bases
TTAGTTGTCCGATGTTCCTCCCTCCCCGCTGGCGGGGAGGGAGGGATTCCACAGCTCCTTAATCATATGAGTCTCTTGTT
GCTCTTGTCTGAATTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAMPAHLTLTGEKQGKIDGSCELQGREKTILVYSMNHDIHMPKDPHSGLPTGKRVHGPLSIVKEFDASSPKMYQALCTGE
HLKDVTLKFYRITKQGTEEHYYTIKLEDAIVVSMKPYMPVTLLEENNPYRHMEEVAFTYRKIKWTWEPNGIEAEDSWSVP
K

Sequences:

>Translated_161_residues
MAMPAHLTLTGEKQGKIDGSCELQGREKTILVYSMNHDIHMPKDPHSGLPTGKRVHGPLSIVKEFDASSPKMYQALCTGE
HLKDVTLKFYRITKQGTEEHYYTIKLEDAIVVSMKPYMPVTLLEENNPYRHMEEVAFTYRKIKWTWEPNGIEAEDSWSVP
K
>Mature_160_residues
AMPAHLTLTGEKQGKIDGSCELQGREKTILVYSMNHDIHMPKDPHSGLPTGKRVHGPLSIVKEFDASSPKMYQALCTGEH
LKDVTLKFYRITKQGTEEHYYTIKLEDAIVVSMKPYMPVTLLEENNPYRHMEEVAFTYRKIKWTWEPNGIEAEDSWSVPK

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18493; Mature: 18362

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPAHLTLTGEKQGKIDGSCELQGREKTILVYSMNHDIHMPKDPHSGLPTGKRVHGPLS
CCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCEECCHHH
IVKEFDASSPKMYQALCTGEHLKDVTLKFYRITKQGTEEHYYTIKLEDAIVVSMKPYMPV
HHHHCCCCCCHHHHHHHCCCCHHHHEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCE
TLLEENNPYRHMEEVAFTYRKIKWTWEPNGIEAEDSWSVPK
EEEECCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AMPAHLTLTGEKQGKIDGSCELQGREKTILVYSMNHDIHMPKDPHSGLPTGKRVHGPLS
CCCCEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCEECCCCCCCCCCCCCEECCHHH
IVKEFDASSPKMYQALCTGEHLKDVTLKFYRITKQGTEEHYYTIKLEDAIVVSMKPYMPV
HHHHCCCCCCHHHHHHHCCCCHHHHEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCE
TLLEENNPYRHMEEVAFTYRKIKWTWEPNGIEAEDSWSVPK
EEEECCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]