| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221496
Identifier: 78221496
GI number: 78221496
Start: 302320
End: 303000
Strand: Direct
Name: 78221496
Synonym: Gmet_0273
Alternate gene names: NA
Gene position: 302320-303000 (Clockwise)
Preceding gene: 78221495
Following gene: 78221497
Centisome position: 7.56
GC content: 66.67
Gene sequence:
>681_bases ATGCATCTGACTGACTGTTTCACGGAACTGGTGGCCTATGTCACCCACTTCCTCCGCACGGCCGCGGTGCGCCAGCCCTC CTACCAGGAGGTCCGCCGCGAAATCGACCTCCTCCTGGCCTCGGGGGAGTCGTGCGTCAGGCGGGAGGGGTTCTCCCGCG ACGACTTCGAGCTGGCCCGCTTCGCCGTCTGCGCCTGGATCGACGAGGCGGTCCTCTCGTCGGCCTGGAGCGAGAAGAGC CTCTGGCTCCGGGAGCAGCTCCAGCGCCTCCACTACAACACCACCGAGGCGGGTGAGGAGTTCTTCACCAGGCTGAACGC CCTGGGGCTCCACCAGCGTGAGGTGCGGGAGGTCTACTACCTCTGTCTCGCCCTCGGCTTCACCGGCAGGTTCTGCAAGC CGGGGGACGAGTATCAGCTGGAGCAGGTGAAGACCGCCCAGCTGAAGCTCCTCGTGGGGAGCTCCGTGGGGCTTCCGTCC CTGGAGCGGACCGAGCTCTTCCCGGAGGCCTATCCGGCGGGAGCGCCCGCCATGGCTCCGGCCCGGCGCCGGGTCGGTTT CTCCCCCCTTGCCGCCGTCTGCCTCGCCGGTCCGGCGGTGTTCTTTGTCATTCTCTTCTTCGTCTACCGCTTCACCCTTT CGGGGGTGGGGGAGAATTTTTTAAGGACGGTGCCGTACTGA
Upstream 100 bases:
>100_bases GGCGTGGCGTTTACGGCGTGCCGACCCGACTCCGTGCTGTCCGGCGTCCTGGCAATCGCGTCGGGACGGATTGCTCCGTT TTTCCCATGAGGGTTATTTC
Downstream 100 bases:
>100_bases GATGAAAACGAAGCTCGTGACCTTTCTCAAGTGGTTTCTCGTGGCGGGAGGGGCGGCAGTGGTCGTCCTTCTCGTTTTTG GTATTGTGCTCGCCCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MHLTDCFTELVAYVTHFLRTAAVRQPSYQEVRREIDLLLASGESCVRREGFSRDDFELARFAVCAWIDEAVLSSAWSEKS LWLREQLQRLHYNTTEAGEEFFTRLNALGLHQREVREVYYLCLALGFTGRFCKPGDEYQLEQVKTAQLKLLVGSSVGLPS LERTELFPEAYPAGAPAMAPARRRVGFSPLAAVCLAGPAVFFVILFFVYRFTLSGVGENFLRTVPY
Sequences:
>Translated_226_residues MHLTDCFTELVAYVTHFLRTAAVRQPSYQEVRREIDLLLASGESCVRREGFSRDDFELARFAVCAWIDEAVLSSAWSEKS LWLREQLQRLHYNTTEAGEEFFTRLNALGLHQREVREVYYLCLALGFTGRFCKPGDEYQLEQVKTAQLKLLVGSSVGLPS LERTELFPEAYPAGAPAMAPARRRVGFSPLAAVCLAGPAVFFVILFFVYRFTLSGVGENFLRTVPY >Mature_226_residues MHLTDCFTELVAYVTHFLRTAAVRQPSYQEVRREIDLLLASGESCVRREGFSRDDFELARFAVCAWIDEAVLSSAWSEKS LWLREQLQRLHYNTTEAGEEFFTRLNALGLHQREVREVYYLCLALGFTGRFCKPGDEYQLEQVKTAQLKLLVGSSVGLPS LERTELFPEAYPAGAPAMAPARRRVGFSPLAAVCLAGPAVFFVILFFVYRFTLSGVGENFLRTVPY
Specific function: Unknown
COG id: COG3455
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25622; Mature: 25622
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTDCFTELVAYVTHFLRTAAVRQPSYQEVRREIDLLLASGESCVRREGFSRDDFELAR CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH FAVCAWIDEAVLSSAWSEKSLWLREQLQRLHYNTTEAGEEFFTRLNALGLHQREVREVYY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LCLALGFTGRFCKPGDEYQLEQVKTAQLKLLVGSSVGLPSLERTELFPEAYPAGAPAMAP HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCHHCCCCCCCCCH ARRRVGFSPLAAVCLAGPAVFFVILFFVYRFTLSGVGENFLRTVPY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLTDCFTELVAYVTHFLRTAAVRQPSYQEVRREIDLLLASGESCVRREGFSRDDFELAR CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH FAVCAWIDEAVLSSAWSEKSLWLREQLQRLHYNTTEAGEEFFTRLNALGLHQREVREVYY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LCLALGFTGRFCKPGDEYQLEQVKTAQLKLLVGSSVGLPSLERTELFPEAYPAGAPAMAP HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCHHCCCCCCCCCH ARRRVGFSPLAAVCLAGPAVFFVILFFVYRFTLSGVGENFLRTVPY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA