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The map label for this gene is ybcJ [C]

Identifier: 78221325

GI number: 78221325

Start: 122523

End: 122720

Strand: Reverse

Name: ybcJ [C]

Synonym: Gmet_0098

Alternate gene names: 78221325

Gene position: 122720-122523 (Counterclockwise)

Preceding gene: 78221327

Following gene: 78221324

Centisome position: 3.07

GC content: 59.6

Gene sequence:

>198_bases
ATGAAGATCGAAACCGAATACATAAAGCTTGATAGTTTTCTGAAGGCCGAGAATATCGTTGCCTCCGGCGGCGAGGCGAA
AATCATCATCGCCGATGGGGAAGTGCGGGTGAACGGCGAGGTGGAGACGCGGCGCGGCAGGAAGCTCCGGGTCGGCGACC
GGGTCGAGGCGGGCGGTGAAACGCTCGTGGTGGAATGA

Upstream 100 bases:

>100_bases
GGCAAATCTCCTTTGGGCGTGAAAAATCTCCTCTTCATAACAAAAAAGTGCTACAAAGACAACCAACTTGGACGAATACC
GTTGGGAGTGCCATAACACG

Downstream 100 bases:

>100_bases
CGGTGGGGGCTCCCATGGAAACCGTAAGCTGCCCTCACTGTGGCTTCGCGAAGGAGATGCCCGCCGGGACCGTACCCAAC
GGGGCGCGGGTGAAATGTCC

Product: RNA-binding S4

Products: NA

Alternate protein names: S4 Domain Protein YaaA; S4 Domain Protein; S4 Domain-Containing Protein YaaA; S4 Region YaaA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MKIETEYIKLDSFLKAENIVASGGEAKIIIADGEVRVNGEVETRRGRKLRVGDRVEAGGETLVVE

Sequences:

>Translated_65_residues
MKIETEYIKLDSFLKAENIVASGGEAKIIIADGEVRVNGEVETRRGRKLRVGDRVEAGGETLVVE
>Mature_65_residues
MKIETEYIKLDSFLKAENIVASGGEAKIIIADGEVRVNGEVETRRGRKLRVGDRVEAGGETLVVE

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7116; Mature: 7116

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIETEYIKLDSFLKAENIVASGGEAKIIIADGEVRVNGEVETRRGRKLRVGDRVEAGGE
CCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCEEECCEEECCCCCEEEECCEECCCCC
TLVVE
EEEEC
>Mature Secondary Structure
MKIETEYIKLDSFLKAENIVASGGEAKIIIADGEVRVNGEVETRRGRKLRVGDRVEAGGE
CCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCEEECCEEECCCCCEEEECCEECCCCC
TLVVE
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA