| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221306
Identifier: 78221306
GI number: 78221306
Start: 97371
End: 98261
Strand: Reverse
Name: 78221306
Synonym: Gmet_0079
Alternate gene names: NA
Gene position: 98261-97371 (Counterclockwise)
Preceding gene: 78221307
Following gene: 78221305
Centisome position: 2.46
GC content: 45.57
Gene sequence:
>891_bases ATGGCTAAGACAATCGATGAGATTATAAATAAACATTATAACGAGGCTGCCGGCGGAATTGTAGACAAAGTTCCATCTGC CTTGAAACGCGGTGAGGGGACCGAGCGTGAGTTCTACATGCTCAAAATTGACCTCGTTGATTCGACGTTATTCACCTGGA CGCGGACTCATAAGACATATCTCAAGCTAGCTCATACTTTTCTTTCCTCGGTTGATGAAATATCCCGCGAATTTGGCGCT GACGATGATCAGGTCGAATATGTCGGAGATAGCATCATTGCCTATTTCAGAGCAGACAAAGTGAACGCACTCTCTGTTCT TTATGCCGCATATTACTGCCGAATAGCAGCTCTACAGATGAAATCTCTCGATGCAACCTTCAGTAAATATCATTTTTTGA CTAAAACAATTCTGCACCATGGGAAATTGATATTGGCCAAAATAGGGCCACGAGGAGATACGTTTGTGACAGCCATAGGC CCGGCGTTACATAGGGCGTGCAAAATGGAATCAAGGGTTTCCCCTGGACAGAGCAGAGTATCGAAGGAATTCAGAGAAAA GCTGCTGGGAAGAGAGAAACTGCTGTTAAAACCAAATTACAAAGAGACCCAAGTACCCAAGGTACCCGAGTTTCAACCGG CAACGCACAATTTATCAAACCTACTTTATCCTTCTTCGAGTCCGGCGACTTTACTTGGTATGAGCCCATCAGATTTGGCG CAGACCACAGAAAATTTGCTGGCTGGAGCAATTGCCCCTCGACGTGGGCTTATGGAATTCGCCCGTACCACTCCATCAGC GCAGACTAAATTCGAAGTCAAACGAGAATTGATTGATTTCTCTGTCAAATGGGATGATGTAGCGAGATACATCGCATTGC AGCGCAGGTAG
Upstream 100 bases:
>100_bases CATATATTCTTGTAATGGCATGGCTCGTCTGTGGTTTTTGGGGTCGGATGTTGTTTCTGTATTACTGTAGTAAATAACCA GCAACCCAGGGTATCTGACA
Downstream 100 bases:
>100_bases AAGAAACTATGACATTCTCTGTCTGGGGACAGGTTATTCGACAGAGAAATAAACTGTCCCCAAAACTGCCGAAACTGCTG CGGGACTGCCCTTTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAKTIDEIINKHYNEAAGGIVDKVPSALKRGEGTEREFYMLKIDLVDSTLFTWTRTHKTYLKLAHTFLSSVDEISREFGA DDDQVEYVGDSIIAYFRADKVNALSVLYAAYYCRIAALQMKSLDATFSKYHFLTKTILHHGKLILAKIGPRGDTFVTAIG PALHRACKMESRVSPGQSRVSKEFREKLLGREKLLLKPNYKETQVPKVPEFQPATHNLSNLLYPSSSPATLLGMSPSDLA QTTENLLAGAIAPRRGLMEFARTTPSAQTKFEVKRELIDFSVKWDDVARYIALQRR
Sequences:
>Translated_296_residues MAKTIDEIINKHYNEAAGGIVDKVPSALKRGEGTEREFYMLKIDLVDSTLFTWTRTHKTYLKLAHTFLSSVDEISREFGA DDDQVEYVGDSIIAYFRADKVNALSVLYAAYYCRIAALQMKSLDATFSKYHFLTKTILHHGKLILAKIGPRGDTFVTAIG PALHRACKMESRVSPGQSRVSKEFREKLLGREKLLLKPNYKETQVPKVPEFQPATHNLSNLLYPSSSPATLLGMSPSDLA QTTENLLAGAIAPRRGLMEFARTTPSAQTKFEVKRELIDFSVKWDDVARYIALQRR >Mature_295_residues AKTIDEIINKHYNEAAGGIVDKVPSALKRGEGTEREFYMLKIDLVDSTLFTWTRTHKTYLKLAHTFLSSVDEISREFGAD DDQVEYVGDSIIAYFRADKVNALSVLYAAYYCRIAALQMKSLDATFSKYHFLTKTILHHGKLILAKIGPRGDTFVTAIGP ALHRACKMESRVSPGQSRVSKEFREKLLGREKLLLKPNYKETQVPKVPEFQPATHNLSNLLYPSSSPATLLGMSPSDLAQ TTENLLAGAIAPRRGLMEFARTTPSAQTKFEVKRELIDFSVKWDDVARYIALQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33336; Mature: 33205
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTIDEIINKHYNEAAGGIVDKVPSALKRGEGTEREFYMLKIDLVDSTLFTWTRTHKTY CCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH LKLAHTFLSSVDEISREFGADDDQVEYVGDSIIAYFRADKVNALSVLYAAYYCRIAALQM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KSLDATFSKYHFLTKTILHHGKLILAKIGPRGDTFVTAIGPALHRACKMESRVSPGQSRV HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHH SKEFREKLLGREKLLLKPNYKETQVPKVPEFQPATHNLSNLLYPSSSPATLLGMSPSDLA HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCHHHHH QTTENLLAGAIAPRRGLMEFARTTPSAQTKFEVKRELIDFSVKWDDVARYIALQRR HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure AKTIDEIINKHYNEAAGGIVDKVPSALKRGEGTEREFYMLKIDLVDSTLFTWTRTHKTY CCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH LKLAHTFLSSVDEISREFGADDDQVEYVGDSIIAYFRADKVNALSVLYAAYYCRIAALQM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KSLDATFSKYHFLTKTILHHGKLILAKIGPRGDTFVTAIGPALHRACKMESRVSPGQSRV HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHH SKEFREKLLGREKLLLKPNYKETQVPKVPEFQPATHNLSNLLYPSSSPATLLGMSPSDLA HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCHHHHH QTTENLLAGAIAPRRGLMEFARTTPSAQTKFEVKRELIDFSVKWDDVARYIALQRR HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA