| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is ybjG [C]
Identifier: 78189982
GI number: 78189982
Start: 2568439
End: 2569041
Strand: Reverse
Name: ybjG [C]
Synonym: Cag_2029
Alternate gene names: 78189982
Gene position: 2569041-2568439 (Counterclockwise)
Preceding gene: 78189983
Following gene: 78189981
Centisome position: 99.88
GC content: 47.76
Gene sequence:
>603_bases ATGACGCTGATTGAGCAAGGAGATGTGTGGCTTTTTGGGGTGCTGAATGGTACTCCAAAAAGCCTTTTGCTTGATGAGCT GATGGTGTACCTTACCACAGTAAAAATGTCGTGGCATATTATACTGTTGGTGGCACTTTTTATGGTGGTTCGTCGAGGGA AGTCAGCGCTGCTTTTGCTGCTTTGTGTCGGACTTGCCGTGGGGCTTTCCGATTTTATAGCTTCCGGCGTGCTCAAGCCA TTGGTGCAGCGAACCCGTCCTTGCTTTGCGCTTGATAATGTTCGGTTACTAATTTCTCAGCCTCGAAGCTACTCTTTTGC CTCCTCTCATGCAGCGAACTCTATGGCAATTGCCGTAGTAGCGTGGCTCTTTTTTTCGCGTGGTGTGGTGGTTGAAAAGC TCTTTACACTCGTAATGTTTTGCTATGCTGTAATGGTTGGTATTTCGCGCATTTACGTAGGCGTTCACTATCCTACCGAT GTGCTTGCTGGCATGGTGATTGGAACGTGCAGTGCCTTGCTTTGCTACCTTATTTTTTCATGGTTGGCGAAAAATATGCC GTTACGAACCACAACGTCGCCCCCATCTCAAAACGATGGCTGA
Upstream 100 bases:
>100_bases TGACGATATGCCAAAGGTGAACTTGGCTCCTGTGGCAAGTAATGCATCGAAAAAGCAGAAAAAAGGGGGAGCGAAAAAGT AAGCGCTCCACTGATAACGT
Downstream 100 bases:
>100_bases TGGCTTCTAACAATTCCTTTTTGACTCCTCTCTTCACCTCTTTTTTTCTCTATGATGGCAGATATGCAGTACCGTAAGGG CGATGTTATTTCGCTACAAG
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTLIEQGDVWLFGVLNGTPKSLLLDELMVYLTTVKMSWHIILLVALFMVVRRGKSALLLLLCVGLAVGLSDFIASGVLKP LVQRTRPCFALDNVRLLISQPRSYSFASSHAANSMAIAVVAWLFFSRGVVVEKLFTLVMFCYAVMVGISRIYVGVHYPTD VLAGMVIGTCSALLCYLIFSWLAKNMPLRTTTSPPSQNDG
Sequences:
>Translated_200_residues MTLIEQGDVWLFGVLNGTPKSLLLDELMVYLTTVKMSWHIILLVALFMVVRRGKSALLLLLCVGLAVGLSDFIASGVLKP LVQRTRPCFALDNVRLLISQPRSYSFASSHAANSMAIAVVAWLFFSRGVVVEKLFTLVMFCYAVMVGISRIYVGVHYPTD VLAGMVIGTCSALLCYLIFSWLAKNMPLRTTTSPPSQNDG >Mature_199_residues TLIEQGDVWLFGVLNGTPKSLLLDELMVYLTTVKMSWHIILLVALFMVVRRGKSALLLLLCVGLAVGLSDFIASGVLKPL VQRTRPCFALDNVRLLISQPRSYSFASSHAANSMAIAVVAWLFFSRGVVVEKLFTLVMFCYAVMVGISRIYVGVHYPTDV LAGMVIGTCSALLCYLIFSWLAKNMPLRTTTSPPSQNDG
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 - InterPro: IPR015414 [H]
Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 21967; Mature: 21835
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIEQGDVWLFGVLNGTPKSLLLDELMVYLTTVKMSWHIILLVALFMVVRRGKSALLLL CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LCVGLAVGLSDFIASGVLKPLVQRTRPCFALDNVRLLISQPRSYSFASSHAANSMAIAVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEECCCCCCHHHHHCCHHHHHHHH AWLFFSRGVVVEKLFTLVMFCYAVMVGISRIYVGVHYPTDVLAGMVIGTCSALLCYLIFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH WLAKNMPLRTTTSPPSQNDG HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLIEQGDVWLFGVLNGTPKSLLLDELMVYLTTVKMSWHIILLVALFMVVRRGKSALLLL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LCVGLAVGLSDFIASGVLKPLVQRTRPCFALDNVRLLISQPRSYSFASSHAANSMAIAVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEECCCCCCHHHHHCCHHHHHHHH AWLFFSRGVVVEKLFTLVMFCYAVMVGISRIYVGVHYPTDVLAGMVIGTCSALLCYLIFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH WLAKNMPLRTTTSPPSQNDG HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]