| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189980
Identifier: 78189980
GI number: 78189980
Start: 2566414
End: 2566908
Strand: Reverse
Name: 78189980
Synonym: Cag_2027
Alternate gene names: NA
Gene position: 2566908-2566414 (Counterclockwise)
Preceding gene: 78189981
Following gene: 78189975
Centisome position: 99.8
GC content: 49.09
Gene sequence:
>495_bases ATGAAAACACTTTACCTTATTCGGCACGCAAAAGCCAGCAGTGGTAACAACTTTGGTGGCGATTTTGAGCGTCCGTTACA TGCCACAGGCATACAAGGCGCTCGCTTTATGGGTGAATTGCTTAAAACGAATGGCGTTTTGCCCGATGCGGTTATTACGA GTTCGGCGTTGCGTACACGTTCAACCGCAACCATTTTATGCGAAATTCTTGGTTTTCCAGCAGAGCGCATTGAGGAGCGC ATGGAAATTTACGAAGGCGGAGCTATGCGGCTTTTATCAATTATTCAGCACATTTCCGAGAGCTGTTCAACCGCAATGTT GATTGGGCACAATCCTACCATCACGGAGCTAACAAGCGTGCTGAGTGGACGAGCGCAAGGCGGCATGGCAACAGGTGGTG TGGCGCATTTGCAGTTTCAAGTAGAGCACTGGAGCGAGGTTGTGGCAGGTTGTGGAACGCTTGTTGCTTACCAATTTCCG CAAGCCTATCAATAA
Upstream 100 bases:
>100_bases AATGTTTCCACAAACCAATCACATTGAGAGCGTTGGTTGTTTTGTGAAGGTGTAAGGCAATTCGGTAATAGAGAATGGTT TGAAACAAGAAAATAATTCC
Downstream 100 bases:
>100_bases GCAACTTTCATTAATCTCTCTCAGAGCGAGGATCTCGATTCATTAAATCGAGAATTGCTTGAGCGGCAGGTTTAGCTTCA AAGAGCATCTCATAAACGGC
Product: putative phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKTLYLIRHAKASSGNNFGGDFERPLHATGIQGARFMGELLKTNGVLPDAVITSSALRTRSTATILCEILGFPAERIEER MEIYEGGAMRLLSIIQHISESCSTAMLIGHNPTITELTSVLSGRAQGGMATGGVAHLQFQVEHWSEVVAGCGTLVAYQFP QAYQ
Sequences:
>Translated_164_residues MKTLYLIRHAKASSGNNFGGDFERPLHATGIQGARFMGELLKTNGVLPDAVITSSALRTRSTATILCEILGFPAERIEER MEIYEGGAMRLLSIIQHISESCSTAMLIGHNPTITELTSVLSGRAQGGMATGGVAHLQFQVEHWSEVVAGCGTLVAYQFP QAYQ >Mature_164_residues MKTLYLIRHAKASSGNNFGGDFERPLHATGIQGARFMGELLKTNGVLPDAVITSSALRTRSTATILCEILGFPAERIEER MEIYEGGAMRLLSIIQHISESCSTAMLIGHNPTITELTSVLSGRAQGGMATGGVAHLQFQVEHWSEVVAGCGTLVAYQFP QAYQ
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 17682; Mature: 17682
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLYLIRHAKASSGNNFGGDFERPLHATGIQGARFMGELLKTNGVLPDAVITSSALRTR CCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH STATILCEILGFPAERIEERMEIYEGGAMRLLSIIQHISESCSTAMLIGHNPTITELTSV HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH LSGRAQGGMATGGVAHLQFQVEHWSEVVAGCGTLVAYQFPQAYQ HHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTLYLIRHAKASSGNNFGGDFERPLHATGIQGARFMGELLKTNGVLPDAVITSSALRTR CCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH STATILCEILGFPAERIEERMEIYEGGAMRLLSIIQHISESCSTAMLIGHNPTITELTSV HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH LSGRAQGGMATGGVAHLQFQVEHWSEVVAGCGTLVAYQFPQAYQ HHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]