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The map label for this gene is spr [H]

Identifier: 78189975

GI number: 78189975

Start: 2561520

End: 2562140

Strand: Reverse

Name: spr [H]

Synonym: Cag_2022

Alternate gene names: 78189975

Gene position: 2562140-2561520 (Counterclockwise)

Preceding gene: 78189980

Following gene: 78189974

Centisome position: 99.61

GC content: 46.7

Gene sequence:

>621_bases
ATGAACTTCCAGCCATTCCCTAAAAACACCCCATGGCGTTTCCCACGAATCAGCGGGCTTTGGCTTGTAAGTACGGCGTT
GATACTTCTTATAAGTATCAGCGGATGCCAAAGTTATTGGGTTAGAACAAAGTATCATATTGAATCGAAATATAGCTCAA
AAAAGCGAAAATCGCATAGTGCGCGCCTTGCTCCCAATGGAGGCTATCAGTTTGCGCAACCATTACCTATGCGCCTTTCG
CAAAGTGCTATGGCGAGCTTTTTAAGCGAGGTTGAACAATTGCGAGGCACCCGTTACCGTAGCGGCGGTTGTTCGCCTGA
CGGCTTTGATTGCTCGGGTTTGGTCTGCTACCTTATGAAGCGCCATTTTGGGTTACTTCTGCCCCGCTCTTCAGCCGATA
TGGCTACGCATGGCGTGATGATAAGTAGCACTTCAGCCCTACAAAAAGGGGATTTACTCTTTTTTAGTATTGACGGGCGA
ACGATTGACCACGTTGGTATTGTAACGGGATGGAATCGCTTTGTTCATGCTGCCACAAGTGGCGTTCGCGAAGATTATAT
AAGCAGTAGTTATTATCGTGAGCGCTTTGCCTTTGGTGCTCGTTTACTTATTGCTGAATAA

Upstream 100 bases:

>100_bases
TTGCACGGGCGTTACCAACCGACGTCCCGCCAAACTTCATAACCGCCATAGCCTCTATAAATTCAAGAGCGTTAGAAAAA
AAATCTTTCATCTTACTGTT

Downstream 100 bases:

>100_bases
TTATTCCCCCTCTTGAAAAAGAATATATTTGAAGAAAAAATTTCGGAACATTTCACCCTTACCGTTATGCCACACATCGG
AAAGCAACCATACATTGAAA

Product: NLP/P60 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNFQPFPKNTPWRFPRISGLWLVSTALILLISISGCQSYWVRTKYHIESKYSSKKRKSHSARLAPNGGYQFAQPLPMRLS
QSAMASFLSEVEQLRGTRYRSGGCSPDGFDCSGLVCYLMKRHFGLLLPRSSADMATHGVMISSTSALQKGDLLFFSIDGR
TIDHVGIVTGWNRFVHAATSGVREDYISSSYYRERFAFGARLLIAE

Sequences:

>Translated_206_residues
MNFQPFPKNTPWRFPRISGLWLVSTALILLISISGCQSYWVRTKYHIESKYSSKKRKSHSARLAPNGGYQFAQPLPMRLS
QSAMASFLSEVEQLRGTRYRSGGCSPDGFDCSGLVCYLMKRHFGLLLPRSSADMATHGVMISSTSALQKGDLLFFSIDGR
TIDHVGIVTGWNRFVHAATSGVREDYISSSYYRERFAFGARLLIAE
>Mature_206_residues
MNFQPFPKNTPWRFPRISGLWLVSTALILLISISGCQSYWVRTKYHIESKYSSKKRKSHSARLAPNGGYQFAQPLPMRLS
QSAMASFLSEVEQLRGTRYRSGGCSPDGFDCSGLVCYLMKRHFGLLLPRSSADMATHGVMISSTSALQKGDLLFFSIDGR
TIDHVGIVTGWNRFVHAATSGVREDYISSSYYRERFAFGARLLIAE

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=110, Percent_Identity=42.7272727272727, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788001, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786421, Length=124, Percent_Identity=35.4838709677419, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787944, Length=186, Percent_Identity=30.6451612903226, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 23135; Mature: 23135

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQPFPKNTPWRFPRISGLWLVSTALILLISISGCQSYWVRTKYHIESKYSSKKRKSHS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEHHHHHHHHHHCCC
ARLAPNGGYQFAQPLPMRLSQSAMASFLSEVEQLRGTRYRSGGCSPDGFDCSGLVCYLMK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
RHFGLLLPRSSADMATHGVMISSTSALQKGDLLFFSIDGRTIDHVGIVTGWNRFVHAATS
HHHCEEECCCCCCHHHCCEEEECCCHHCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHH
GVREDYISSSYYRERFAFGARLLIAE
HHHHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MNFQPFPKNTPWRFPRISGLWLVSTALILLISISGCQSYWVRTKYHIESKYSSKKRKSHS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEHHHHHHHHHHCCC
ARLAPNGGYQFAQPLPMRLSQSAMASFLSEVEQLRGTRYRSGGCSPDGFDCSGLVCYLMK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
RHFGLLLPRSSADMATHGVMISSTSALQKGDLLFFSIDGRTIDHVGIVTGWNRFVHAATS
HHHCEEECCCCCCHHHCCEEEECCCHHCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHH
GVREDYISSSYYRERFAFGARLLIAE
HHHHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]