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The map label for this gene is pimB [H]

Identifier: 78189823

GI number: 78189823

Start: 2376775

End: 2377902

Strand: Reverse

Name: pimB [H]

Synonym: Cag_1868

Alternate gene names: 78189823

Gene position: 2377902-2376775 (Counterclockwise)

Preceding gene: 78189824

Following gene: 78189822

Centisome position: 92.45

GC content: 51.68

Gene sequence:

>1128_bases
TTGCGAATAGTGCTGCTCTCTCCTTTTCCGCCGCTAAAGGGAGGCATTGCCCATTGTAGCGGGGCGTTACATGCTGCACT
GACGGCAGCAGGTGATGCTGTTGTTGTACTTCCTTTTAAAAAGCTTTACCCTTCATTTCCCTCATTTCTTTTTTCAGCCC
TTTCACCCCCAACGCCAAGCAATGCCACGTTGGTGCTCTACAATCCCCTAACGTGGCTTTCAGCCGTGCGCCGCATTCGT
GAGCAAAAGCCTGAGCTGTTGGTGATTGCATATTGGAGTGGTGTATTAGCGCCGCTTGCTTTACTGTTTTGTCGCTTGAG
TGGTACGCGCATGCTGCTGCTTTTGCACAATCTTACAGGGCATGAAGCTTTTTGGGGTGAATCCTTTTTGCAACGCAAGC
TTCTCTCCTCTGTTGCTGGTGTGGTAACGCTATCGCATACGGTAACCCGTCAAGTACAGCACGTAGCACCCTCGCTGCCA
ACGCTTACTCTGTTTCATCCCATTGAAAAACTTCCAGCGCCATCATTTTCCAAGTTAGAGGCTCGAAAAGCGCTTGGGCT
TACCAGCAATGCGCCCGTGCTACTTTTTTTTGGTTATGTGCGCCGCTACAAAGGGTTGGATTTACTGTTGCAAGCGCTCC
CGCATGTGGTGGCGCAAGAACCGTCGCTACAAGTGGTGGTAGCAGGTTATTTTTATGAGCCACTCCCGCGTTATCAACAG
ATAGCTGAAACGTTAGGCATTACTCATAACGTTACCTTTCATGCGGGCTATGTGCCCTCCGAGAAAAATGCTACCTATTT
TGCGGCTGCCGATGGCGTGGTACTGCCTTATCGTGCTGCAACCCAATCGGGTGTGGTGCCGATGGCGTTTGCGTATGGGG
TGCCGGTGATTGTAACGCCTGTTGGTGCGTTATCGGAAATGGTGCAGCATGGCACAACGGGGTGGATTGCAAAAGCTGCC
TCGCCCGATGCAATTGCCGCAGCGCTGAGAGAGTGGCTTGCAAACCGAGAGCGTTGGAGTGCTATGCGTTCTTCTATCGA
AGCCATGAGGGATAGTGTATCGTGGGAACGCTTTGCGGCGGAGTGCCAACCCTTTTTTGCTTCACTTATTGACAAGGGGC
GCAGATGA

Upstream 100 bases:

>100_bases
AAGGCACGAAGCTTAAGCTCAAACTTGATGGACCTGACGAAGTGGATGCTGCTCGCCAGCTTGTAGAATTTTTTGAGCAG
GGTTTTGGAGAAGTGTAGCG

Downstream 100 bases:

>100_bases
AGGGAGATATAGAGGGAACATTAGCCATTGTGGTGTTGAATTGGAACGGTGCGGCTGATACCATTGCCTGCCTCCATTCC
ATCATTCCAACCCTTGATGC

Product: glycosyl transferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRIVLLSPFPPLKGGIAHCSGALHAALTAAGDAVVVLPFKKLYPSFPSFLFSALSPPTPSNATLVLYNPLTWLSAVRRIR
EQKPELLVIAYWSGVLAPLALLFCRLSGTRMLLLLHNLTGHEAFWGESFLQRKLLSSVAGVVTLSHTVTRQVQHVAPSLP
TLTLFHPIEKLPAPSFSKLEARKALGLTSNAPVLLFFGYVRRYKGLDLLLQALPHVVAQEPSLQVVVAGYFYEPLPRYQQ
IAETLGITHNVTFHAGYVPSEKNATYFAAADGVVLPYRAATQSGVVPMAFAYGVPVIVTPVGALSEMVQHGTTGWIAKAA
SPDAIAAALREWLANRERWSAMRSSIEAMRDSVSWERFAAECQPFFASLIDKGRR

Sequences:

>Translated_375_residues
MRIVLLSPFPPLKGGIAHCSGALHAALTAAGDAVVVLPFKKLYPSFPSFLFSALSPPTPSNATLVLYNPLTWLSAVRRIR
EQKPELLVIAYWSGVLAPLALLFCRLSGTRMLLLLHNLTGHEAFWGESFLQRKLLSSVAGVVTLSHTVTRQVQHVAPSLP
TLTLFHPIEKLPAPSFSKLEARKALGLTSNAPVLLFFGYVRRYKGLDLLLQALPHVVAQEPSLQVVVAGYFYEPLPRYQQ
IAETLGITHNVTFHAGYVPSEKNATYFAAADGVVLPYRAATQSGVVPMAFAYGVPVIVTPVGALSEMVQHGTTGWIAKAA
SPDAIAAALREWLANRERWSAMRSSIEAMRDSVSWERFAAECQPFFASLIDKGRR
>Mature_375_residues
MRIVLLSPFPPLKGGIAHCSGALHAALTAAGDAVVVLPFKKLYPSFPSFLFSALSPPTPSNATLVLYNPLTWLSAVRRIR
EQKPELLVIAYWSGVLAPLALLFCRLSGTRMLLLLHNLTGHEAFWGESFLQRKLLSSVAGVVTLSHTVTRQVQHVAPSLP
TLTLFHPIEKLPAPSFSKLEARKALGLTSNAPVLLFFGYVRRYKGLDLLLQALPHVVAQEPSLQVVVAGYFYEPLPRYQQ
IAETLGITHNVTFHAGYVPSEKNATYFAAADGVVLPYRAATQSGVVPMAFAYGVPVIVTPVGALSEMVQHGTTGWIAKAA
SPDAIAAALREWLANRERWSAMRSSIEAMRDSVSWERFAAECQPFFASLIDKGRR

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 40952; Mature: 40952

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVLLSPFPPLKGGIAHCSGALHAALTAAGDAVVVLPFKKLYPSFPSFLFSALSPPTPS
CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHCCCCCCC
NATLVLYNPLTWLSAVRRIREQKPELLVIAYWSGVLAPLALLFCRLSGTRMLLLLHNLTG
CCEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
HEAFWGESFLQRKLLSSVAGVVTLSHTVTRQVQHVAPSLPTLTLFHPIEKLPAPSFSKLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH
ARKALGLTSNAPVLLFFGYVRRYKGLDLLLQALPHVVAQEPSLQVVVAGYFYEPLPRYQQ
HHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHH
IAETLGITHNVTFHAGYVPSEKNATYFAAADGVVLPYRAATQSGVVPMAFAYGVPVIVTP
HHHHHCCCCCEEEEECCCCCCCCCEEEEECCCEEECCHHCCCCCCCHHHHHCCCCEEEEC
VGALSEMVQHGTTGWIAKAASPDAIAAALREWLANRERWSAMRSSIEAMRDSVSWERFAA
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHH
ECQPFFASLIDKGRR
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIVLLSPFPPLKGGIAHCSGALHAALTAAGDAVVVLPFKKLYPSFPSFLFSALSPPTPS
CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHCCCCCCC
NATLVLYNPLTWLSAVRRIREQKPELLVIAYWSGVLAPLALLFCRLSGTRMLLLLHNLTG
CCEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
HEAFWGESFLQRKLLSSVAGVVTLSHTVTRQVQHVAPSLPTLTLFHPIEKLPAPSFSKLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH
ARKALGLTSNAPVLLFFGYVRRYKGLDLLLQALPHVVAQEPSLQVVVAGYFYEPLPRYQQ
HHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHH
IAETLGITHNVTFHAGYVPSEKNATYFAAADGVVLPYRAATQSGVVPMAFAYGVPVIVTP
HHHHHCCCCCEEEEECCCCCCCCCEEEEECCCEEECCHHCCCCCCCHHHHHCCCCEEEEC
VGALSEMVQHGTTGWIAKAASPDAIAAALREWLANRERWSAMRSSIEAMRDSVSWERFAA
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHH
ECQPFFASLIDKGRR
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA