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The map label for this gene is 78189821

Identifier: 78189821

GI number: 78189821

Start: 2374880

End: 2375887

Strand: Reverse

Name: 78189821

Synonym: Cag_1866

Alternate gene names: NA

Gene position: 2375887-2374880 (Counterclockwise)

Preceding gene: 78189822

Following gene: 78189820

Centisome position: 92.37

GC content: 38.89

Gene sequence:

>1008_bases
ATGCAAATGAAAAATAATCAATCATCCTTTATTCTCTTTACAACCGAAGATGCAAAAATAGCGGTAGATGTTCGCTTTGA
GGAAGAAACAGTATGGCTTACGCAAGAGCAAATGGCAGTTTTATTCGGCAAGGCACGCACAACCATTACCGAACACATAC
AAAATGTTTTTAAAGAAGGTGAGTTAAACGAAGAAGTGGTGTGTCGGAATTTCCGACATACCACTCAACATGGAGCAATT
GAGGGGAAAACACAAGAAACATGGGTAAAACATTATAATTTAGATGTTATTATCTCTGTGGGCTATCGCGTAAAATCTTT
GCGAGGAACGCAGTTTCGTCAATGGGCAACCAAACGCCTGAACGAATATATCCGCAAAGGTTTTACTATGGACGATGAGC
GCCTTAAAAATATAGGCGGTGGAGGTTATTGGAAAGAATTGTTGCAACGCATACGCGACATTCGTGCATCCGAAAAAGTA
TTCTATCGCCAAGTGCTTGATATTTACGCAACCAGCATTGATTACGACCCTAAAGACGAGGTTTCGCTTGCATTTTTTAA
AAAAGTGCAAAACAAAATTCATTATGCAGTACATGGTCAAACAGCAGCCGAGCTTATTTTCAATCGTGCCGATGCCGAAA
AAGATTTTATGGGTTTAATGACTTTCTCAGGCAGTCGTCCCTACTTGAAAGATGTGGTGGTGGTAAAAAATTATTTAAAC
GAAAAAGAGCTTCGCGCACTTGGGCAAATAGTTTCAGGATATCTTGATTTTGCTGAACGACAAGCGGAGCGAGAACAAGC
AATGACTATGAAAGATTGGGCGGAACATTTGGATAGAATTTTAACTATGAGCGGTGAAAAGCTGTTGCAAGAAGCAGGCA
CGATAAGCCATGAAAAAGCGGTAGAAAAAGCTACTACAGAGTATAAAAAGTATCAGCAAAAAACATTGAGCGAAGCAGAA
TATAATTACTTTGAAAGTTTGAAAATTTTAGAAAGCAAAATTCATTAG

Upstream 100 bases:

>100_bases
GTTTCGTTTGGTGAGGAGTGTTGGTGGTTCCTTGCTTTTTAAAATCGGTAAGATGAGGTAATGCGAATAGGATCACTAAT
AATTATAGAAAGACGTAATA

Downstream 100 bases:

>100_bases
AAAGAATAGCAATACAAGAAGGGAATTTTCACTATGGCAAGCTATAGAACCAAGCTCGATAGCACCTATTTCAGCGATGC
AGCTCATGCGCTTCGTTGGC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MQMKNNQSSFILFTTEDAKIAVDVRFEEETVWLTQEQMAVLFGKARTTITEHIQNVFKEGELNEEVVCRNFRHTTQHGAI
EGKTQETWVKHYNLDVIISVGYRVKSLRGTQFRQWATKRLNEYIRKGFTMDDERLKNIGGGGYWKELLQRIRDIRASEKV
FYRQVLDIYATSIDYDPKDEVSLAFFKKVQNKIHYAVHGQTAAELIFNRADAEKDFMGLMTFSGSRPYLKDVVVVKNYLN
EKELRALGQIVSGYLDFAERQAEREQAMTMKDWAEHLDRILTMSGEKLLQEAGTISHEKAVEKATTEYKKYQQKTLSEAE
YNYFESLKILESKIH

Sequences:

>Translated_335_residues
MQMKNNQSSFILFTTEDAKIAVDVRFEEETVWLTQEQMAVLFGKARTTITEHIQNVFKEGELNEEVVCRNFRHTTQHGAI
EGKTQETWVKHYNLDVIISVGYRVKSLRGTQFRQWATKRLNEYIRKGFTMDDERLKNIGGGGYWKELLQRIRDIRASEKV
FYRQVLDIYATSIDYDPKDEVSLAFFKKVQNKIHYAVHGQTAAELIFNRADAEKDFMGLMTFSGSRPYLKDVVVVKNYLN
EKELRALGQIVSGYLDFAERQAEREQAMTMKDWAEHLDRILTMSGEKLLQEAGTISHEKAVEKATTEYKKYQQKTLSEAE
YNYFESLKILESKIH
>Mature_335_residues
MQMKNNQSSFILFTTEDAKIAVDVRFEEETVWLTQEQMAVLFGKARTTITEHIQNVFKEGELNEEVVCRNFRHTTQHGAI
EGKTQETWVKHYNLDVIISVGYRVKSLRGTQFRQWATKRLNEYIRKGFTMDDERLKNIGGGGYWKELLQRIRDIRASEKV
FYRQVLDIYATSIDYDPKDEVSLAFFKKVQNKIHYAVHGQTAAELIFNRADAEKDFMGLMTFSGSRPYLKDVVVVKNYLN
EKELRALGQIVSGYLDFAERQAEREQAMTMKDWAEHLDRILTMSGEKLLQEAGTISHEKAVEKATTEYKKYQQKTLSEAE
YNYFESLKILESKIH

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39134; Mature: 39134

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKNNQSSFILFTTEDAKIAVDVRFEEETVWLTQEQMAVLFGKARTTITEHIQNVFKEG
CCCCCCCCCEEEEEECCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
ELNEEVVCRNFRHTTQHGAIEGKTQETWVKHYNLDVIISVGYRVKSLRGTQFRQWATKRL
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHH
NEYIRKGFTMDDERLKNIGGGGYWKELLQRIRDIRASEKVFYRQVLDIYATSIDYDPKDE
HHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VSLAFFKKVQNKIHYAVHGQTAAELIFNRADAEKDFMGLMTFSGSRPYLKDVVVVKNYLN
HHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHHHHHHEECCCCCHHHHHHHHHHHHC
EKELRALGQIVSGYLDFAERQAEREQAMTMKDWAEHLDRILTMSGEKLLQEAGTISHEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHH
VEKATTEYKKYQQKTLSEAEYNYFESLKILESKIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQMKNNQSSFILFTTEDAKIAVDVRFEEETVWLTQEQMAVLFGKARTTITEHIQNVFKEG
CCCCCCCCCEEEEEECCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
ELNEEVVCRNFRHTTQHGAIEGKTQETWVKHYNLDVIISVGYRVKSLRGTQFRQWATKRL
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHH
NEYIRKGFTMDDERLKNIGGGGYWKELLQRIRDIRASEKVFYRQVLDIYATSIDYDPKDE
HHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VSLAFFKKVQNKIHYAVHGQTAAELIFNRADAEKDFMGLMTFSGSRPYLKDVVVVKNYLN
HHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHHHHHHEECCCCCHHHHHHHHHHHHC
EKELRALGQIVSGYLDFAERQAEREQAMTMKDWAEHLDRILTMSGEKLLQEAGTISHEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHH
VEKATTEYKKYQQKTLSEAEYNYFESLKILESKIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA