| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
Click here to switch to the map view.
The map label for this gene is engB
Identifier: 78189773
GI number: 78189773
Start: 2339403
End: 2339987
Strand: Reverse
Name: engB
Synonym: Cag_1817
Alternate gene names: 78189773
Gene position: 2339987-2339403 (Counterclockwise)
Preceding gene: 78189775
Following gene: 78189772
Centisome position: 90.98
GC content: 44.27
Gene sequence:
>585_bases ATGAACATTACTTCCGCTTCATTTGTTGCGAGTTATACGTCACTTCATGCTCTGCCAGAAGCGGTGCTGCCTGAAATTGT TTTTGCGGGACGTTCTAACGTGGGGAAATCGTCGCTGCTTAATTCATTAACAGGGTTGAAAGGGCTTGCTAAAACAAGCG CGAAACCGGGTAAAACACGGCAGATTAATTACTTCCTTATTAACGAACTCTTTTATTTTGTTGATTTGCCCGGCTATGGT TATGCAGCCGTTAGCCAAAGCGAAAAAGCGGCATGGGGGCAGTTGCTTGCAAACTATATTGAGCGGCGCGATGCTATTTC GTTAGTTGTGGTGCTGGTGGATTCACGCCATCCATTTATGGAAAATGATGTGGCTATGCTGGAGTTTTTGGAGTTTCATG GTCGCCCCTACGGCATTGTGATGACCAAATCCGATAAGCTGAACCAAAGCGAAAAATCTAAATGCCAGCGAGTTGCCAAA ACTTATGCGGCAAAAGCCAAATTTGTTGTAAATTATTCATCCTTTTCGGGCGCAGGTAAAGCTCTGCTCCTCTCGCATAT TGATCACTCAATTATCTCTCAATAA
Upstream 100 bases:
>100_bases TTAAGGCAAGCTGTTTAGCTTCATTATAATATATCCGTTAAAACGGTTCTCTTTCATAACTGTTGCTTTCTGGTAGTCTC ACCTTTATTTGCTCTTCTCT
Downstream 100 bases:
>100_bases ATCAGCATTATCGTGGAATCAAAAAACTTCAAGCTCCCTTCACCATTAGCAACTGTGATTGTTGGTACTCAGTTTGGTGA TGAAGGCAAAGGAAAGTTGG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNITSASFVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLINELFYFVDLPGYG YAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFMENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEKSKCQRVAK TYAAKAKFVVNYSSFSGAGKALLLSHIDHSIISQ
Sequences:
>Translated_194_residues MNITSASFVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLINELFYFVDLPGYG YAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFMENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEKSKCQRVAK TYAAKAKFVVNYSSFSGAGKALLLSHIDHSIISQ >Mature_194_residues MNITSASFVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLINELFYFVDLPGYG YAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFMENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEKSKCQRVAK TYAAKAKFVVNYSSFSGAGKALLLSHIDHSIISQ
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=142, Percent_Identity=35.2112676056338, Blast_Score=88, Evalue=6e-18, Organism=Escherichia coli, GI145693205, Length=147, Percent_Identity=42.8571428571429, Blast_Score=123, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6320543, Length=139, Percent_Identity=30.9352517985612, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_CHLCH (Q3APK7)
Other databases:
- EMBL: CP000108 - RefSeq: YP_380111.1 - HSSP: O57939 - ProteinModelPortal: Q3APK7 - SMR: Q3APK7 - STRING: Q3APK7 - GeneID: 3746448 - GenomeReviews: CP000108_GR - KEGG: cch:Cag_1817 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FIVNYSS - ProtClustDB: PRK00454 - BioCyc: CCHL340177:CAG_1817-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 21302; Mature: 21302
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITSASFVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE QINYFLINELFYFVDLPGYGYAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFM EEHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC ENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEKSKCQRVAKTYAAKAKFVVNYSSFSGAGK CCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCH ALLLSHIDHSIISQ HHHHHHHHHHHHCC >Mature Secondary Structure MNITSASFVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE QINYFLINELFYFVDLPGYGYAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHPFM EEHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC ENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEKSKCQRVAKTYAAKAKFVVNYSSFSGAGK CCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCH ALLLSHIDHSIISQ HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA