| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
Click here to switch to the map view.
The map label for this gene is gmhB [H]
Identifier: 78189763
GI number: 78189763
Start: 2328750
End: 2329352
Strand: Reverse
Name: gmhB [H]
Synonym: Cag_1807
Alternate gene names: 78189763
Gene position: 2329352-2328750 (Counterclockwise)
Preceding gene: 78189764
Following gene: 78189762
Centisome position: 90.56
GC content: 45.44
Gene sequence:
>603_bases ATGAGCGAACAACAGCGCATTAAGGTGCTTTTTTTAGATCGTGATGGCACTATTAATCACGATACGGGTTCCTACATTAA TTCTATTGAGCAATTTAAGCTGATTGAGCGTGCTGATGAGGCTATTGCACTTGCCAAGCAAGCGGGCTTTCGCATTGTGA TTGTAAGCAATCAAGCTGGTATTGCGCGTGGCATTGCTACGTTTGAGCAAGTTGATACTGTTAACAGCCATTTGCAATCG TTACTTGCACGTAAAAACGCCACCTACGACCGTTGCTATTACTGCCCTTACCATCCCAACTATCCTCATCCAGAGTATGA CCTTTTAGCTGGTTTCCGTAAACCTGAAACAGGCATGGTTGAGCAGGCTGTTGCTGAATTTGCGGCTGAAGGGTTACAGG TTGATCGCTCTGCCTCTTTTTTTGTTGGTGATAAGGTACTTGATGTTGAGTGTGGAGAACGTGCTGGACTTACCTCTGTG TTAGTGCGCACGGGGCACAACGAAGAGGCACTCTGCTACGAGCGCAATATTCATCCTGCTTTTGTTGCTGACGATCTTTA TCAAGCCATTACGGAATTTATTTTGCCCCATTCGCAAGAATAG
Upstream 100 bases:
>100_bases GGTTGAGCGTGCCATGAGTAGTGATTTTAGTTGGCACAACACGGCAGAGGCGTATGGGCAGTTGTACCGCAATCTTCTTG GCAAATAGGGGGGAAATGGT
Downstream 100 bases:
>100_bases GGGGCATTGTAATAACTTTCTTCTCCGCATGTGAGCCTCTCTCTTTACCTGCACATTCCTTTCTGCCGAGAGCGCTGCCC TTACTGCGATTTTTATTTAA
Product: histidinol-phosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSEQQRIKVLFLDRDGTINHDTGSYINSIEQFKLIERADEAIALAKQAGFRIVIVSNQAGIARGIATFEQVDTVNSHLQS LLARKNATYDRCYYCPYHPNYPHPEYDLLAGFRKPETGMVEQAVAEFAAEGLQVDRSASFFVGDKVLDVECGERAGLTSV LVRTGHNEEALCYERNIHPAFVADDLYQAITEFILPHSQE
Sequences:
>Translated_200_residues MSEQQRIKVLFLDRDGTINHDTGSYINSIEQFKLIERADEAIALAKQAGFRIVIVSNQAGIARGIATFEQVDTVNSHLQS LLARKNATYDRCYYCPYHPNYPHPEYDLLAGFRKPETGMVEQAVAEFAAEGLQVDRSASFFVGDKVLDVECGERAGLTSV LVRTGHNEEALCYERNIHPAFVADDLYQAITEFILPHSQE >Mature_199_residues SEQQRIKVLFLDRDGTINHDTGSYINSIEQFKLIERADEAIALAKQAGFRIVIVSNQAGIARGIATFEQVDTVNSHLQSL LARKNATYDRCYYCPYHPNYPHPEYDLLAGFRKPETGMVEQAVAEFAAEGLQVDRSASFFVGDKVLDVECGERAGLTSVL VRTGHNEEALCYERNIHPAFVADDLYQAITEFILPHSQE
Specific function: Converts the D-glycero-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-D-manno-heptose 1-phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=162, Percent_Identity=39.5061728395062, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI87082027, Length=157, Percent_Identity=27.3885350318471, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 22442; Mature: 22311
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQQRIKVLFLDRDGTINHDTGSYINSIEQFKLIERADEAIALAKQAGFRIVIVSNQAG CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC IARGIATFEQVDTVNSHLQSLLARKNATYDRCYYCPYHPNYPHPEYDLLAGFRKPETGMV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHH EQAVAEFAAEGLQVDRSASFFVGDKVLDVECGERAGLTSVLVRTGHNEEALCYERNIHPA HHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCHH FVADDLYQAITEFILPHSQE HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEQQRIKVLFLDRDGTINHDTGSYINSIEQFKLIERADEAIALAKQAGFRIVIVSNQAG CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC IARGIATFEQVDTVNSHLQSLLARKNATYDRCYYCPYHPNYPHPEYDLLAGFRKPETGMV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHH EQAVAEFAAEGLQVDRSASFFVGDKVLDVECGERAGLTSVLVRTGHNEEALCYERNIHPA HHHHHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCHH FVADDLYQAITEFILPHSQE HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]