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The map label for this gene is fixC [C]

Identifier: 78189756

GI number: 78189756

Start: 2320903

End: 2322540

Strand: Reverse

Name: fixC [C]

Synonym: Cag_1800

Alternate gene names: 78189756

Gene position: 2322540-2320903 (Counterclockwise)

Preceding gene: 78189757

Following gene: 78189755

Centisome position: 90.3

GC content: 46.58

Gene sequence:

>1638_bases
ATGAATCTTGAACCCGAATCCGTTGACTTCGATATTCTTTTTATTGGTGCAGGTCCAGCGAATGTAACTGCCGCCATCCA
CCTTCAGCGCCTTCTCAACCGCTATAATGAGACTGCCACAACAGCGCTTGAACCCTCAATTGCCATTATTGAAAAAGGGC
GTTACGCGAGTGCTCATTTGCTTTCAGGAGCATTGCTTGATCCTAAAGCACTTGAGGAGTTTTTCCCCGATTATCGCAAC
CAAGGATGCCCCATTGAAGCAACAGTATCCAAAGAGAGCATCTGGTATGTAAGTGCAAAACGGAAGTTCCCCCTGCCATT
TATTCCAGAGCAATTCAGTAATAAAAAATCACTTATGGTATCGCTCAGTAGGCTTGGCGCGTGGTTAGCCGAGCAAGCTG
AGGCTGAGGGCATCCAATTGTTTGATAGCACTGCGGCTGTTGCTCCATGTATAGAAAGTGGACGTTTAACGGGCGTTTAT
ACCGATGACAAAGGGGTGGATAGTAACGGTGCTCCCAAAGCAAACTATGAGCAAGGATTGTTGCTTAAAAGTAAGGTTAC
CATTGTTGGCGAAGGTGCAGCAGGTTCACTTACGAGGCAGCTTGCCAAGCACTTTCCTGCGCTACACGGCAAAACATTGC
AACGCTACGAAACAGGTGTTAAAGAAACATGGAGCATACCTGAAGGGCGGCTTCAAGCAGGTGAAGTGTATCATACTTTT
GGCTATCCGCTTGAGCAAGAGCACTATGGTGGTGGATGGGTCTATGCTTTTTCGCCTACTCTTATTTCGTTGGGATTTGT
TTCTTCCCCAAACCAAAGTAACCCAACCTGCGATCCACATGAAAACCTCCAACGTTATAAGCTCCACCCGCTTATTCAGC
CAATTCTTGCTGGTGGCAAGCTGTTAGAATGTGGGGCGCGAACCATTACTTCGGGCGGTTTAGATGCTATGCCGCAAATA
TATGGTGATGGATTTTTGCTCACGGGAGAGTCGGCAGGTATGGTGGATATGCAGCGCCATAAGGGTATTCACTTGGCGAT
GAAGTCGGGCATGATGGCGGCTGAAACGCTCTTTGACTGCCTTATTGCCGATGATTTTTCAACTGCGCAATTGCAGCGCT
ACGAAGAGCGTTTTCGTGCATCATGGGCATATCAAGAGCTGTATGATGCTCGCAATTACCGCAAAGCGTTTGATAATGGA
TTGTATGCAGGGTTGCTTGCGGCTGGTTTACAAGTAAATATTCCGGGACTTTCGTTTGCTACAAAGGTGGGGAAAAAAAT
AAAACGTGAGCTACCTGAAGCCGATGTTTGTGCTGATGGGGTTCTTACGTTTACAAAAGAGCGAAGCCTCTTCAACGCCA
ATATTCAGCATGAAGAAAATCAACCCTGCCATCTGCATATCAATCAAGCCGATATAGAAAATATTTGCCTAAAGCAATGC
ACTTCACGCTATGGCAATCCCTGCCAATATTTTTGCCCTGCTGAAGTCTATGAAATTGTTACGGAACCAAAGTTTGCATT
AAAGCTTAATCCCTCCAACTGCTTGCATTGTAAAACCTGCGATGTTGCCGATCCATACGGTATTATCACATGGACGCCAC
CCGAAGGTGGTGGAGGTCCTGGGTATAAGGTGGGGTAA

Upstream 100 bases:

>100_bases
TGCCACGCTTGTGGATGTTACTGGGATTGTGATTTACTTTAGCGTAGCATCGTTGCTGTTAAGTGGAATTTTGCTGTAGC
ATCAAACTTATGCAATAATC

Downstream 100 bases:

>100_bases
GAGGGAGAGGTTGGGTTGATTGGGTTGAGCCTGTTTTGCCTCCTTTGTTGAGGTAATATCTATATTAACACATATGGTCG
TAGCCGAATTCGAAGCTGAG

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNLEPESVDFDILFIGAGPANVTAAIHLQRLLNRYNETATTALEPSIAIIEKGRYASAHLLSGALLDPKALEEFFPDYRN
QGCPIEATVSKESIWYVSAKRKFPLPFIPEQFSNKKSLMVSLSRLGAWLAEQAEAEGIQLFDSTAAVAPCIESGRLTGVY
TDDKGVDSNGAPKANYEQGLLLKSKVTIVGEGAAGSLTRQLAKHFPALHGKTLQRYETGVKETWSIPEGRLQAGEVYHTF
GYPLEQEHYGGGWVYAFSPTLISLGFVSSPNQSNPTCDPHENLQRYKLHPLIQPILAGGKLLECGARTITSGGLDAMPQI
YGDGFLLTGESAGMVDMQRHKGIHLAMKSGMMAAETLFDCLIADDFSTAQLQRYEERFRASWAYQELYDARNYRKAFDNG
LYAGLLAAGLQVNIPGLSFATKVGKKIKRELPEADVCADGVLTFTKERSLFNANIQHEENQPCHLHINQADIENICLKQC
TSRYGNPCQYFCPAEVYEIVTEPKFALKLNPSNCLHCKTCDVADPYGIITWTPPEGGGGPGYKVG

Sequences:

>Translated_545_residues
MNLEPESVDFDILFIGAGPANVTAAIHLQRLLNRYNETATTALEPSIAIIEKGRYASAHLLSGALLDPKALEEFFPDYRN
QGCPIEATVSKESIWYVSAKRKFPLPFIPEQFSNKKSLMVSLSRLGAWLAEQAEAEGIQLFDSTAAVAPCIESGRLTGVY
TDDKGVDSNGAPKANYEQGLLLKSKVTIVGEGAAGSLTRQLAKHFPALHGKTLQRYETGVKETWSIPEGRLQAGEVYHTF
GYPLEQEHYGGGWVYAFSPTLISLGFVSSPNQSNPTCDPHENLQRYKLHPLIQPILAGGKLLECGARTITSGGLDAMPQI
YGDGFLLTGESAGMVDMQRHKGIHLAMKSGMMAAETLFDCLIADDFSTAQLQRYEERFRASWAYQELYDARNYRKAFDNG
LYAGLLAAGLQVNIPGLSFATKVGKKIKRELPEADVCADGVLTFTKERSLFNANIQHEENQPCHLHINQADIENICLKQC
TSRYGNPCQYFCPAEVYEIVTEPKFALKLNPSNCLHCKTCDVADPYGIITWTPPEGGGGPGYKVG
>Mature_545_residues
MNLEPESVDFDILFIGAGPANVTAAIHLQRLLNRYNETATTALEPSIAIIEKGRYASAHLLSGALLDPKALEEFFPDYRN
QGCPIEATVSKESIWYVSAKRKFPLPFIPEQFSNKKSLMVSLSRLGAWLAEQAEAEGIQLFDSTAAVAPCIESGRLTGVY
TDDKGVDSNGAPKANYEQGLLLKSKVTIVGEGAAGSLTRQLAKHFPALHGKTLQRYETGVKETWSIPEGRLQAGEVYHTF
GYPLEQEHYGGGWVYAFSPTLISLGFVSSPNQSNPTCDPHENLQRYKLHPLIQPILAGGKLLECGARTITSGGLDAMPQI
YGDGFLLTGESAGMVDMQRHKGIHLAMKSGMMAAETLFDCLIADDFSTAQLQRYEERFRASWAYQELYDARNYRKAFDNG
LYAGLLAAGLQVNIPGLSFATKVGKKIKRELPEADVCADGVLTFTKERSLFNANIQHEENQPCHLHINQADIENICLKQC
TSRYGNPCQYFCPAEVYEIVTEPKFALKLNPSNCLHCKTCDVADPYGIITWTPPEGGGGPGYKVG

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=564, Percent_Identity=35.9929078014184, Blast_Score=355, Evalue=4e-98,
Organism=Escherichia coli, GI1786227, Length=402, Percent_Identity=28.3582089552239, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787991, Length=411, Percent_Identity=27.7372262773723, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI87082155, Length=333, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=566, Percent_Identity=34.982332155477, Blast_Score=329, Evalue=2e-90,
Organism=Saccharomyces cerevisiae, GI6324932, Length=581, Percent_Identity=33.2185886402754, Blast_Score=310, Evalue=3e-85,
Organism=Drosophila melanogaster, GI24652256, Length=554, Percent_Identity=36.101083032491, Blast_Score=342, Evalue=5e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59820; Mature: 59820

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEPESVDFDILFIGAGPANVTAAIHLQRLLNRYNETATTALEPSIAIIEKGRYASAHL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCHHHH
LSGALLDPKALEEFFPDYRNQGCPIEATVSKESIWYVSAKRKFPLPFIPEQFSNKKSLMV
HCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHCCCHHHHH
SLSRLGAWLAEQAEAEGIQLFDSTAAVAPCIESGRLTGVYTDDKGVDSNGAPKANYEQGL
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCE
LLKSKVTIVGEGAAGSLTRQLAKHFPALHGKTLQRYETGVKETWSIPEGRLQAGEVYHTF
EEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEEEEC
GYPLEQEHYGGGWVYAFSPTLISLGFVSSPNQSNPTCDPHENLQRYKLHPLIQPILAGGK
CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LLECGARTITSGGLDAMPQIYGDGFLLTGESAGMVDMQRHKGIHLAMKSGMMAAETLFDC
EEECCCHHCCCCCCHHCHHHHCCCEEEECCCCCCEEHHHCCCEEEEHHCCCHHHHHHHHH
LIADDFSTAQLQRYEERFRASWAYQELYDARNYRKAFDNGLYAGLLAAGLQVNIPGLSFA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCHHH
TKVGKKIKRELPEADVCADGVLTFTKERSLFNANIQHEENQPCHLHINQADIENICLKQC
HHHHHHHHHHCCCCHHCCCCCEEEECCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHH
TSRYGNPCQYFCPAEVYEIVTEPKFALKLNPSNCLHCKTCDVADPYGIITWTPPEGGGGP
HHHCCCCEEEECHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCC
GYKVG
CCCCC
>Mature Secondary Structure
MNLEPESVDFDILFIGAGPANVTAAIHLQRLLNRYNETATTALEPSIAIIEKGRYASAHL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCHHHH
LSGALLDPKALEEFFPDYRNQGCPIEATVSKESIWYVSAKRKFPLPFIPEQFSNKKSLMV
HCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHCCCHHHHH
SLSRLGAWLAEQAEAEGIQLFDSTAAVAPCIESGRLTGVYTDDKGVDSNGAPKANYEQGL
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCE
LLKSKVTIVGEGAAGSLTRQLAKHFPALHGKTLQRYETGVKETWSIPEGRLQAGEVYHTF
EEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEEEEC
GYPLEQEHYGGGWVYAFSPTLISLGFVSSPNQSNPTCDPHENLQRYKLHPLIQPILAGGK
CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LLECGARTITSGGLDAMPQIYGDGFLLTGESAGMVDMQRHKGIHLAMKSGMMAAETLFDC
EEECCCHHCCCCCCHHCHHHHCCCEEEECCCCCCEEHHHCCCEEEEHHCCCHHHHHHHHH
LIADDFSTAQLQRYEERFRASWAYQELYDARNYRKAFDNGLYAGLLAAGLQVNIPGLSFA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCHHH
TKVGKKIKRELPEADVCADGVLTFTKERSLFNANIQHEENQPCHLHINQADIENICLKQC
HHHHHHHHHHCCCCHHCCCCCEEEECCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHH
TSRYGNPCQYFCPAEVYEIVTEPKFALKLNPSNCLHCKTCDVADPYGIITWTPPEGGGGP
HHHCCCCEEEECHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCC
GYKVG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]