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The map label for this gene is ygdQ [C]

Identifier: 78189709

GI number: 78189709

Start: 2270051

End: 2270812

Strand: Reverse

Name: ygdQ [C]

Synonym: Cag_1753

Alternate gene names: 78189709

Gene position: 2270812-2270051 (Counterclockwise)

Preceding gene: 78189713

Following gene: 78189702

Centisome position: 88.29

GC content: 43.44

Gene sequence:

>762_bases
ATGTTTGAATGGATAACACAACCCGAAGCATGGATAGCGCTTGCAACTTTAACCGCGCTCGAAATTGTACTCGGTATTGA
CAACATTATTTTTATCTCCATCCTTGTCGGGCGGCTACCCGAAGAGCAGCGCAATAAAGGACGAACCATGGGGCTGGCGC
TTGCCATGCTTACCCGCATCGCACTATTGCTTTCTATAACATGGGTGATGAGCTTAACGGAAGGGCTTTTCACCATCATG
GATATCAACTTCTCTGGACGTGATCTTATTTTGTTGGGAGGCGGTCTTTTTCTCTTGGCAAAAAGCACCCATGAAATTCA
CCACAGCCTTGAAGGTGCCGAAGAGAGCAGCAACAGTAACCCTTCCAGTAAAGCATTCATCCTAACATTGCTACAAATTG
CGGTTATTGATATTGTTTTTTCGCTTGACTCGGTAATTACAGCGGTAGGACTTGCTGATGATGTTGCGGTAATGATTACG
GCAATTGTTATTTCTATGGGAATTATGATGCTTGGTGCTAAAGCTATTAGCGAATTTGTTGAAGCACATCCAACCATTAA
AATGTTAGCTTTGAGCTTTCTCATTTTAGTTGGTGTAACGCTTACAGCCGAAAGCTTTCATGCGGAAATTCCAAAAGGGT
ACATTTACTTTGCTATGGCATTCTCGGTAACGGTGGAAATGCTCAACATTCGCTTACGCAAAAAAGATGCTAAGCCTGTG
CATCTTCACTCTACCTTACCAATGCAGGAAGAGGAGGCTTAA

Upstream 100 bases:

>100_bases
ACGCACAGTTGCTTACATTCACGCCGATTCATTATGAGGGAACTGTAAGGTGCAGCCCCTTTCCCATAACGTTATACATT
AATTTAAAATAGAAGCACTT

Downstream 100 bases:

>100_bases
GCCGTACAATCTCACTCATAACACAAAAACCCCGTATAGCAGCGGGGTTTTCTGTTGACAACATATCACATCTCCCACCC
AATCAAGCAGCGTAGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MFEWITQPEAWIALATLTALEIVLGIDNIIFISILVGRLPEEQRNKGRTMGLALAMLTRIALLLSITWVMSLTEGLFTIM
DINFSGRDLILLGGGLFLLAKSTHEIHHSLEGAEESSNSNPSSKAFILTLLQIAVIDIVFSLDSVITAVGLADDVAVMIT
AIVISMGIMMLGAKAISEFVEAHPTIKMLALSFLILVGVTLTAESFHAEIPKGYIYFAMAFSVTVEMLNIRLRKKDAKPV
HLHSTLPMQEEEA

Sequences:

>Translated_253_residues
MFEWITQPEAWIALATLTALEIVLGIDNIIFISILVGRLPEEQRNKGRTMGLALAMLTRIALLLSITWVMSLTEGLFTIM
DINFSGRDLILLGGGLFLLAKSTHEIHHSLEGAEESSNSNPSSKAFILTLLQIAVIDIVFSLDSVITAVGLADDVAVMIT
AIVISMGIMMLGAKAISEFVEAHPTIKMLALSFLILVGVTLTAESFHAEIPKGYIYFAMAFSVTVEMLNIRLRKKDAKPV
HLHSTLPMQEEEA
>Mature_253_residues
MFEWITQPEAWIALATLTALEIVLGIDNIIFISILVGRLPEEQRNKGRTMGLALAMLTRIALLLSITWVMSLTEGLFTIM
DINFSGRDLILLGGGLFLLAKSTHEIHHSLEGAEESSNSNPSSKAFILTLLQIAVIDIVFSLDSVITAVGLADDVAVMIT
AIVISMGIMMLGAKAISEFVEAHPTIKMLALSFLILVGVTLTAESFHAEIPKGYIYFAMAFSVTVEMLNIRLRKKDAKPV
HLHSTLPMQEEEA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=236, Percent_Identity=58.8983050847458, Blast_Score=251, Evalue=4e-68,
Organism=Escherichia coli, GI1788119, Length=251, Percent_Identity=46.6135458167331, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI87082033, Length=227, Percent_Identity=48.8986784140969, Blast_Score=213, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27651; Mature: 27651

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWITQPEAWIALATLTALEIVLGIDNIIFISILVGRLPEEQRNKGRTMGLALAMLTRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHH
ALLLSITWVMSLTEGLFTIMDINFSGRDLILLGGGLFLLAKSTHEIHHSLEGAEESSNSN
HHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCC
PSSKAFILTLLQIAVIDIVFSLDSVITAVGLADDVAVMITAIVISMGIMMLGAKAISEFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAHPTIKMLALSFLILVGVTLTAESFHAEIPKGYIYFAMAFSVTVEMLNIRLRKKDAKPV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
HLHSTLPMQEEEA
EEECCCCCCCCCC
>Mature Secondary Structure
MFEWITQPEAWIALATLTALEIVLGIDNIIFISILVGRLPEEQRNKGRTMGLALAMLTRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHH
ALLLSITWVMSLTEGLFTIMDINFSGRDLILLGGGLFLLAKSTHEIHHSLEGAEESSNSN
HHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCC
PSSKAFILTLLQIAVIDIVFSLDSVITAVGLADDVAVMITAIVISMGIMMLGAKAISEFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAHPTIKMLALSFLILVGVTLTAESFHAEIPKGYIYFAMAFSVTVEMLNIRLRKKDAKPV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
HLHSTLPMQEEEA
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]