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The map label for this gene is rpmF

Identifier: 78189623

GI number: 78189623

Start: 2164809

End: 2164997

Strand: Reverse

Name: rpmF

Synonym: Cag_1666

Alternate gene names: 78189623

Gene position: 2164997-2164809 (Counterclockwise)

Preceding gene: 78189624

Following gene: 78189622

Centisome position: 84.17

GC content: 50.26

Gene sequence:

>189_bases
ATGGCTAATCCAACGTGCAAAATGTCGAAATCACGTCGCGACAAGCGACGCGCTCAATTTAACGCCCGCACAAAAGCTGC
TGTTACGGTTAATTGCCCACATTGTGGCGAACCAACGCTTTCTCACCGTGCATGTCGCCACTGCGGTCATTATCGCGGTC
GCTTTGTATTGAACAAGGCTGAGAAGTAA

Upstream 100 bases:

>100_bases
CTTCTCATCCTATAAATAGTGAATGGCAAGAAGCGCTGGACAAATTAAAACAAAAGTATTCTTCTTAACCCCGTTGATTC
TATAAATCTGAAAGAGAACC

Downstream 100 bases:

>100_bases
GAAAGAACTTCCATTCACCTAATCACGATCGTCCCAAATATGTTAACCATTGTTGTTGACGCTATGGGTGGTGATAACGC
TCCCGCCTGTGTGGTTGAAG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MANPTCKMSKSRRDKRRAQFNARTKAAVTVNCPHCGEPTLSHRACRHCGHYRGRFVLNKAEK

Sequences:

>Translated_62_residues
MANPTCKMSKSRRDKRRAQFNARTKAAVTVNCPHCGEPTLSHRACRHCGHYRGRFVLNKAEK
>Mature_61_residues
ANPTCKMSKSRRDKRRAQFNARTKAAVTVNCPHCGEPTLSHRACRHCGHYRGRFVLNKAEK

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_CHLCH (Q3AQ07)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379961.1
- ProteinModelPortal:   Q3AQ07
- SMR:   Q3AQ07
- STRING:   Q3AQ07
- GeneID:   3747260
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1666
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   HRACRHC
- ProtClustDB:   PRK12286
- BioCyc:   CCHL340177:CAG_1666-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7084; Mature: 6953

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPTCKMSKSRRDKRRAQFNARTKAAVTVNCPHCGEPTLSHRACRHCGHYRGRFVLNKA
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC
EK
CC
>Mature Secondary Structure 
ANPTCKMSKSRRDKRRAQFNARTKAAVTVNCPHCGEPTLSHRACRHCGHYRGRFVLNKA
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC
EK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA