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The map label for this gene is 78189501

Identifier: 78189501

GI number: 78189501

Start: 2020049

End: 2021623

Strand: Reverse

Name: 78189501

Synonym: Cag_1541

Alternate gene names: NA

Gene position: 2021623-2020049 (Counterclockwise)

Preceding gene: 78189502

Following gene: 78189496

Centisome position: 78.6

GC content: 46.22

Gene sequence:

>1575_bases
ATGGGGATTGTTATAAACCTCTTATTGCTTGTATTAGCGGCTCTTGTGGCGTTTGTTGCAGGCTTTTTTATTGGGCGCTA
CTTTCTTGAGCGCATTGGTACTACAAAGGTTTTAGAGGCTGAAGAACGAGCGGTGCAAATTGTGCAGGAAGCTCAAAAAG
AGGCAAATGAGTACAAGGAATTAAAGGTTAGCGAAGTTAATCAGGAGTGGAAAAAAAAGCGTCGTGAGTTTGAGCAAGAT
GTGCTTATTAAGAACAACAAATTTGCACAGTTACAAAAGCAGTTGCAGCAACGCGAAGCGCAACTGAAAAAGCAATCGCA
AGATGTGCGCGATGCTGAGCGCAAATTGCAAGATCAGCGCAAAGAAGTAGAGCAGTTAAGTGATTCGGTGAAGCTTCGTG
CTACTGAGCTTGAGCGCGTTATTGTGGAGCAAAATCAACGTCTCGAAAGCATTAGCAATCTGCAAGCTGATGAGGCTCGC
CAAATGCTTATTGATAATATGGTTACACAAGCACGCGAAGAAGCAAGCAACACCATTCACCGCATTCACGAAGAGGCTGA
GCAGCAAGCCACGCGCATGGCAGAAAAAACCCTCATTACGGCTATCCAGCGCATCTCTTTTGAGCAAACCACTGAAAATG
CTCTTTCGGTAGTTCACATTCAAAGTGATGAATTAAAAGGGCGCATTATTGGTCGTGAAGGGCGCAACATTAAAGCTTTT
GAAAATGCTACTGGGGTTGACATTATTGTTGACGATACCCCCGAAGTGGTTATTCTCTCCTGCTTTGATCCCTTGCGCCG
AGAGCTGGCAAAACTCACCCTTAAAAAATTGCTTGCCGATGGCATTATTCATCCCGTAGCTATTGAAAAAGCTTATGCGG
ATGCTACCAAAGAGATTGACGATGTTGTCTATAGTGCGGGCGAAGAGGTGGCGGCATCGCTCCAACTTAACGACATTCCC
ACCGAAGTGATTGCGCTTCTTGGCAAAATGAAGTTCCACACCGTGTATGGGCAGAACTTGCTACAACATAGCCGTGAAGT
AGCAATGCTTGCAGGCGTTATGGCGGCAGAGTTAAAGCTTGATGCACGTATGGCAAAACGGGCAGGTTTATTGCACGATA
TTGGCTTAGTGCTGCCCGAAAGCGATGAGCCACATGCAATTACGGGCATGAATTTTATGAAGAAATTTAATGAGTCAGAC
CAACTGCTTAACGCTATTGGCGCTCACCATGGTGATATGGAAAAAGAGTCGCCACTTGCCGATTTAGTTGATGCCGCCAA
CACCATTTCGCTTTCACGTCCCGGTGCGCGTGGTGCCGTAACGGCTGATGGCAACGTTAAACGCCTTGAAAGCCTTGAAG
AAATTGCAAAGGGCTTCCCTGGAGTGTTAAAGACCTATGCGTTACAAGCAGGGCGCGAAATTCGTGTGATTGTGGAAGGC
GATAACGTCAGCGATTCGCAAGCCGATATGCTTGCCCACGATATTGCTCGTAAAATTGAGTCGGAAGCGCAATATCCCGG
TCAAATTAAAGTTTCCATTATTCGCGAAAAGCGTTCAGTGGCTTACGCCAAGTAA

Upstream 100 bases:

>100_bases
TCTTACTCTGCCCTGTTGTGGTGCGGTTTTTTTGTTTCAACACGTTGGTTTTCATCCGCAACGATAAAGGGTGAAAACGT
AACACAATGGGAGAATGTTA

Downstream 100 bases:

>100_bases
CTTCCATGTTACTCAGGGAGAGATGAAAAAAAGGAGGGCGGGTTTTCTAACCCGCCTTTTCTTGTTTGGTGTGTTCGGAA
AGAATGTCTGCTCTCTTTTT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MGIVINLLLLVLAALVAFVAGFFIGRYFLERIGTTKVLEAEERAVQIVQEAQKEANEYKELKVSEVNQEWKKKRREFEQD
VLIKNNKFAQLQKQLQQREAQLKKQSQDVRDAERKLQDQRKEVEQLSDSVKLRATELERVIVEQNQRLESISNLQADEAR
QMLIDNMVTQAREEASNTIHRIHEEAEQQATRMAEKTLITAIQRISFEQTTENALSVVHIQSDELKGRIIGREGRNIKAF
ENATGVDIIVDDTPEVVILSCFDPLRRELAKLTLKKLLADGIIHPVAIEKAYADATKEIDDVVYSAGEEVAASLQLNDIP
TEVIALLGKMKFHTVYGQNLLQHSREVAMLAGVMAAELKLDARMAKRAGLLHDIGLVLPESDEPHAITGMNFMKKFNESD
QLLNAIGAHHGDMEKESPLADLVDAANTISLSRPGARGAVTADGNVKRLESLEEIAKGFPGVLKTYALQAGREIRVIVEG
DNVSDSQADMLAHDIARKIESEAQYPGQIKVSIIREKRSVAYAK

Sequences:

>Translated_524_residues
MGIVINLLLLVLAALVAFVAGFFIGRYFLERIGTTKVLEAEERAVQIVQEAQKEANEYKELKVSEVNQEWKKKRREFEQD
VLIKNNKFAQLQKQLQQREAQLKKQSQDVRDAERKLQDQRKEVEQLSDSVKLRATELERVIVEQNQRLESISNLQADEAR
QMLIDNMVTQAREEASNTIHRIHEEAEQQATRMAEKTLITAIQRISFEQTTENALSVVHIQSDELKGRIIGREGRNIKAF
ENATGVDIIVDDTPEVVILSCFDPLRRELAKLTLKKLLADGIIHPVAIEKAYADATKEIDDVVYSAGEEVAASLQLNDIP
TEVIALLGKMKFHTVYGQNLLQHSREVAMLAGVMAAELKLDARMAKRAGLLHDIGLVLPESDEPHAITGMNFMKKFNESD
QLLNAIGAHHGDMEKESPLADLVDAANTISLSRPGARGAVTADGNVKRLESLEEIAKGFPGVLKTYALQAGREIRVIVEG
DNVSDSQADMLAHDIARKIESEAQYPGQIKVSIIREKRSVAYAK
>Mature_523_residues
GIVINLLLLVLAALVAFVAGFFIGRYFLERIGTTKVLEAEERAVQIVQEAQKEANEYKELKVSEVNQEWKKKRREFEQDV
LIKNNKFAQLQKQLQQREAQLKKQSQDVRDAERKLQDQRKEVEQLSDSVKLRATELERVIVEQNQRLESISNLQADEARQ
MLIDNMVTQAREEASNTIHRIHEEAEQQATRMAEKTLITAIQRISFEQTTENALSVVHIQSDELKGRIIGREGRNIKAFE
NATGVDIIVDDTPEVVILSCFDPLRRELAKLTLKKLLADGIIHPVAIEKAYADATKEIDDVVYSAGEEVAASLQLNDIPT
EVIALLGKMKFHTVYGQNLLQHSREVAMLAGVMAAELKLDARMAKRAGLLHDIGLVLPESDEPHAITGMNFMKKFNESDQ
LLNAIGAHHGDMEKESPLADLVDAANTISLSRPGARGAVTADGNVKRLESLEEIAKGFPGVLKTYALQAGREIRVIVEGD
NVSDSQADMLAHDIARKIESEAQYPGQIKVSIIREKRSVAYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_CHLCH (Q3AQC9)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379839.1
- ProteinModelPortal:   Q3AQC9
- STRING:   Q3AQC9
- GeneID:   3746600
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1541
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- ProtClustDB:   PRK12704
- BioCyc:   CCHL340177:CAG_1541-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 58607; Mature: 58476

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c848a4)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVINLLLLVLAALVAFVAGFFIGRYFLERIGTTKVLEAEERAVQIVQEAQKEANEYKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKVSEVNQEWKKKRREFEQDVLIKNNKFAQLQKQLQQREAQLKKQSQDVRDAERKLQDQR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEQLSDSVKLRATELERVIVEQNQRLESISNLQADEARQMLIDNMVTQAREEASNTIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIHEEAEQQATRMAEKTLITAIQRISFEQTTENALSVVHIQSDELKGRIIGREGRNIKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEECCCCCCEEEE
ENATGVDIIVDDTPEVVILSCFDPLRRELAKLTLKKLLADGIIHPVAIEKAYADATKEID
CCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DVVYSAGEEVAASLQLNDIPTEVIALLGKMKFHTVYGQNLLQHSREVAMLAGVMAAELKL
HHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARMAKRAGLLHDIGLVLPESDEPHAITGMNFMKKFNESDQLLNAIGAHHGDMEKESPLA
HHHHHHHCCHHHHHCCEECCCCCCCEEHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHH
DLVDAANTISLSRPGARGAVTADGNVKRLESLEEIAKGFPGVLKTYALQAGREIRVIVEG
HHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEC
DNVSDSQADMLAHDIARKIESEAQYPGQIKVSIIREKRSVAYAK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHCCCH
>Mature Secondary Structure 
GIVINLLLLVLAALVAFVAGFFIGRYFLERIGTTKVLEAEERAVQIVQEAQKEANEYKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKVSEVNQEWKKKRREFEQDVLIKNNKFAQLQKQLQQREAQLKKQSQDVRDAERKLQDQR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEQLSDSVKLRATELERVIVEQNQRLESISNLQADEARQMLIDNMVTQAREEASNTIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIHEEAEQQATRMAEKTLITAIQRISFEQTTENALSVVHIQSDELKGRIIGREGRNIKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEECCCCCCEEEE
ENATGVDIIVDDTPEVVILSCFDPLRRELAKLTLKKLLADGIIHPVAIEKAYADATKEID
CCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DVVYSAGEEVAASLQLNDIPTEVIALLGKMKFHTVYGQNLLQHSREVAMLAGVMAAELKL
HHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARMAKRAGLLHDIGLVLPESDEPHAITGMNFMKKFNESDQLLNAIGAHHGDMEKESPLA
HHHHHHHCCHHHHHCCEECCCCCCCEEHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHH
DLVDAANTISLSRPGARGAVTADGNVKRLESLEEIAKGFPGVLKTYALQAGREIRVIVEG
HHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEC
DNVSDSQADMLAHDIARKIESEAQYPGQIKVSIIREKRSVAYAK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA