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The map label for this gene is 78189454

Identifier: 78189454

GI number: 78189454

Start: 1963955

End: 1964386

Strand: Reverse

Name: 78189454

Synonym: Cag_1493

Alternate gene names: NA

Gene position: 1964386-1963955 (Counterclockwise)

Preceding gene: 78189457

Following gene: 78189453

Centisome position: 76.37

GC content: 45.14

Gene sequence:

>432_bases
ATGAAAATTCTTACGAAAAAAGCAGATTACGCAATTCGGGCGCTCTTAATGTTGGCAGCTAAAGAGGGTGGTTTTATGTC
GGCAAAAGCTATTGCAGAGGCGCAAGATATTCCCTATCAATTTTTGCGTTCCTTGTTGCAAGAGTTAATGCACCATCATT
TGGTGGCTTCAAAAGAGGGCGCACATGGTGGATTTCGTATAGAAACCAATCCCGATAATATTTCAGTTAAGCAACTTATT
GAGATTTTTCAGGGCGAGGTGCAGGTGTCGGAGTGCATGTTTCGTAAGCAAGTGTGTCGCAACCGTTCGAGTTGTGTGCT
GCGCCACGAAATTATGCGCATTGAAGAGGTGGTGAGCCATGAATTTGGTCAGCTTACCATCGGCAGTTTATTGCGCAAAT
TGCAAATGCAGCAAGGAACAGGGGCGGCTTAG

Upstream 100 bases:

>100_bases
AGCGTTTCAGTTCCATTTTAAAGGCGGAGCAAAAAAGTTTTTGGATTTCTCTTAACTGATAGTAACTTTAAATCAGTTAA
GTCAATCGCCATTCAACGCC

Downstream 100 bases:

>100_bases
TTTTTTTTGCTTAGAACTGATACTAATTTTATATCAATTTTTAAGGAGATGATGATGCAACGGCAGATTATTGCAATAGA
TGAAAAAAAATGTACGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: BadM/Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator Badm/Rrf2 Family; Transcriptional Regulator; Transcriptional Regulator Rrf2 Family; Rrf2 Family Protein Transcriptional Regulator; Transcription Factor IscR; Transcriptional Regulator YrzC; RRF2 Protein Family; RRF2 Family Protein; FeS Assembly SUF System Regulator

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELMHHHLVASKEGAHGGFRIETNPDNISVKQLI
EIFQGEVQVSECMFRKQVCRNRSSCVLRHEIMRIEEVVSHEFGQLTIGSLLRKLQMQQGTGAA

Sequences:

>Translated_143_residues
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELMHHHLVASKEGAHGGFRIETNPDNISVKQLI
EIFQGEVQVSECMFRKQVCRNRSSCVLRHEIMRIEEVVSHEFGQLTIGSLLRKLQMQQGTGAA
>Mature_143_residues
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELMHHHLVASKEGAHGGFRIETNPDNISVKQLI
EIFQGEVQVSECMFRKQVCRNRSSCVLRHEIMRIEEVVSHEFGQLTIGSLLRKLQMQQGTGAA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16096; Mature: 16096

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELMHHHLVASKEG
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AHGGFRIETNPDNISVKQLIEIFQGEVQVSECMFRKQVCRNRSSCVLRHEIMRIEEVVSH
CCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EFGQLTIGSLLRKLQMQQGTGAA
HCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKILTKKADYAIRALLMLAAKEGGFMSAKAIAEAQDIPYQFLRSLLQELMHHHLVASKEG
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AHGGFRIETNPDNISVKQLIEIFQGEVQVSECMFRKQVCRNRSSCVLRHEIMRIEEVVSH
CCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EFGQLTIGSLLRKLQMQQGTGAA
HCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA