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The map label for this gene is 78189452

Identifier: 78189452

GI number: 78189452

Start: 1962389

End: 1962793

Strand: Reverse

Name: 78189452

Synonym: Cag_1491

Alternate gene names: NA

Gene position: 1962793-1962389 (Counterclockwise)

Preceding gene: 78189453

Following gene: 162319771

Centisome position: 76.31

GC content: 50.12

Gene sequence:

>405_bases
ATGCTAAAAGATGCCTTAGGAAGTTATCGGGGGAGCCTTGCCGAGCTGAATAAAATGGTGGAGGTGCAACCACACAATGC
CGAACTATGGTTTGCCCGTGCAAATGAGCGTAGCGGTTGTGGCGACTACGCAGGTGCCATCAGCGATTACACCACAGCCT
TGCTGCTTGGCTTGCGCTTTCGAGAAGCGGTAAATGCGTATGGCAATCGAGGCATGGCGCGGCTTGCAATGGGAGATATG
CGTGGAGCTATGGAAGATTTTAGCACCATTATTGCTCGCCAACCAAAAAACCGATCGCTCTTGCGTACAGCATATCTCAA
GCGAGCACACTTACGCGAAAAGCAAGGTGATGAGGTTGGGGCGCAAAATGATCGTAAAGCCGCAGATTGTATTAATGGTA
AATGA

Upstream 100 bases:

>100_bases
GGGGGTTATGTAACATGATTGACGTTTTCATGTAGGGGTAACCCTTGCGGTTACCCTAAAAAAGGTGGTTCAATAATTTT
ATTAGATACAAAAGAACACC

Downstream 100 bases:

>100_bases
TTGGTGATGGGGAAATGTTAACCCCCTCCCCGCCTAACGGCGGTACTCCCCCTTAGCAGGGGGAGAGTTTAAGAAAAAAA
TTCCCCTCCAATGGAGGGGT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLKDALGSYRGSLAELNKMVEVQPHNAELWFARANERSGCGDYAGAISDYTTALLLGLRFREAVNAYGNRGMARLAMGDM
RGAMEDFSTIIARQPKNRSLLRTAYLKRAHLREKQGDEVGAQNDRKAADCINGK

Sequences:

>Translated_134_residues
MLKDALGSYRGSLAELNKMVEVQPHNAELWFARANERSGCGDYAGAISDYTTALLLGLRFREAVNAYGNRGMARLAMGDM
RGAMEDFSTIIARQPKNRSLLRTAYLKRAHLREKQGDEVGAQNDRKAADCINGK
>Mature_134_residues
MLKDALGSYRGSLAELNKMVEVQPHNAELWFARANERSGCGDYAGAISDYTTALLLGLRFREAVNAYGNRGMARLAMGDM
RGAMEDFSTIIARQPKNRSLLRTAYLKRAHLREKQGDEVGAQNDRKAADCINGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14839; Mature: 14839

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDALGSYRGSLAELNKMVEVQPHNAELWFARANERSGCGDYAGAISDYTTALLLGLRF
CCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
REAVNAYGNRGMARLAMGDMRGAMEDFSTIIARQPKNRSLLRTAYLKRAHLREKQGDEVG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AQNDRKAADCINGK
CCCCCCHHHHCCCC
>Mature Secondary Structure
MLKDALGSYRGSLAELNKMVEVQPHNAELWFARANERSGCGDYAGAISDYTTALLLGLRF
CCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
REAVNAYGNRGMARLAMGDMRGAMEDFSTIIARQPKNRSLLRTAYLKRAHLREKQGDEVG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AQNDRKAADCINGK
CCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA