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The map label for this gene is dapH [H]

Identifier: 78189441

GI number: 78189441

Start: 1946569

End: 1947132

Strand: Reverse

Name: dapH [H]

Synonym: Cag_1480

Alternate gene names: 78189441

Gene position: 1947132-1946569 (Counterclockwise)

Preceding gene: 78189442

Following gene: 78189440

Centisome position: 75.7

GC content: 39.36

Gene sequence:

>564_bases
ATGAATCCATGGAAAAATCTCCAAAAAAGATATTTTCCTGCACTATGTTACTGGCTGGGAAACCATTTTTTTATGAATTG
GACACCCTATCCTGTTAGGCATTGGTTCTTGAGAAAATATTGCAATGTAAAAATTGGAAAGGATTCAAGTATTTGTATGG
GTTGCTTTATTACCGGCCAAAAAATTGAAATTGGTCTGAACACTGTCATTAACAGATTTACATACCTTGATGGTCGTGTC
GCTTTACGCATTGGTAACAATGTAAATATTTCACATTATACACTTATCCAGACGCTGACCCATGACCCTCAAAGTAGCAA
TTTTACCTGTCAGGAAAAACCGGTCACCATCGGCGATAATGTGTGGATAGGCGCACGTGCAATTATATGTCCGGGTGTAG
CTATAGGTGAAGGCGCTGTCATTGCAGCAGGAGCTGTAGTAATAAAAGATGTGCCACCCTATACCATAGTAGGAGGTAAT
CCTGCAAGATACATCAAGACTCGTACTAACGACCTACATTATAAAACACGATACTTTCCTTTACTCGATACCGATATCCA
GTAA

Upstream 100 bases:

>100_bases
GCCGGAAAAAGATTTATCGCCATTATGCATTTAAGAATGTGGTGGCACAATATGAAGAAATCATGAATCAAGTAACTGAA
CCAGTAACTTACGAACCACA

Downstream 100 bases:

>100_bases
AATCATTTTTTTATGAAAGCCCCATCAGTCAGTGTTATTTTGCCACTCTATAACCATGAGCAATATATTGACAAAACGCT
TACCAGTATTTTCGAACAGA

Product: acetyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNPWKNLQKRYFPALCYWLGNHFFMNWTPYPVRHWFLRKYCNVKIGKDSSICMGCFITGQKIEIGLNTVINRFTYLDGRV
ALRIGNNVNISHYTLIQTLTHDPQSSNFTCQEKPVTIGDNVWIGARAIICPGVAIGEGAVIAAGAVVIKDVPPYTIVGGN
PARYIKTRTNDLHYKTRYFPLLDTDIQ

Sequences:

>Translated_187_residues
MNPWKNLQKRYFPALCYWLGNHFFMNWTPYPVRHWFLRKYCNVKIGKDSSICMGCFITGQKIEIGLNTVINRFTYLDGRV
ALRIGNNVNISHYTLIQTLTHDPQSSNFTCQEKPVTIGDNVWIGARAIICPGVAIGEGAVIAAGAVVIKDVPPYTIVGGN
PARYIKTRTNDLHYKTRYFPLLDTDIQ
>Mature_187_residues
MNPWKNLQKRYFPALCYWLGNHFFMNWTPYPVRHWFLRKYCNVKIGKDSSICMGCFITGQKIEIGLNTVINRFTYLDGRV
ALRIGNNVNISHYTLIQTLTHDPQSSNFTCQEKPVTIGDNVWIGARAIICPGVAIGEGAVIAAGAVVIKDVPPYTIVGGN
PARYIKTRTNDLHYKTRYFPLLDTDIQ

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786664, Length=88, Percent_Identity=55.6818181818182, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786537, Length=123, Percent_Identity=36.5853658536585, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788367, Length=157, Percent_Identity=29.9363057324841, Blast_Score=72, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322243, Length=125, Percent_Identity=42.4, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013710
- InterPro:   IPR001451
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004 [H]

Pfam domain/function: PF08503 DapD_N; PF00132 Hexapep [H]

EC number: =2.3.1.89 [H]

Molecular weight: Translated: 21257; Mature: 21257

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPWKNLQKRYFPALCYWLGNHFFMNWTPYPVRHWFLRKYCNVKIGKDSSICMGCFITGQ
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCEEECCCCCEEEEEEEECC
KIEIGLNTVINRFTYLDGRVALRIGNNVNISHYTLIQTLTHDPQSSNFTCQEKPVTIGDN
EEEECHHHHHHHHEECCCEEEEEECCCCCCHHEEEEEECCCCCCCCCEEECCCCEEECCC
VWIGARAIICPGVAIGEGAVIAAGAVVIKDVPPYTIVGGNPARYIKTRTNDLHYKTRYFP
EEECCEEEEECCEEECCCCEEEECEEEEECCCCEEEECCCCCEEEEECCCCEEEEEEEEE
LLDTDIQ
EECCCCC
>Mature Secondary Structure
MNPWKNLQKRYFPALCYWLGNHFFMNWTPYPVRHWFLRKYCNVKIGKDSSICMGCFITGQ
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCEEECCCCCEEEEEEEECC
KIEIGLNTVINRFTYLDGRVALRIGNNVNISHYTLIQTLTHDPQSSNFTCQEKPVTIGDN
EEEECHHHHHHHHEECCCEEEEEECCCCCCHHEEEEEECCCCCCCCCEEECCCCEEECCC
VWIGARAIICPGVAIGEGAVIAAGAVVIKDVPPYTIVGGNPARYIKTRTNDLHYKTRYFP
EEECCEEEEECCEEECCCCEEEECEEEEECCCCEEEECCCCCEEEEECCCCEEEEEEEEE
LLDTDIQ
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]