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The map label for this gene is epsH [H]

Identifier: 78189440

GI number: 78189440

Start: 1945633

End: 1946556

Strand: Reverse

Name: epsH [H]

Synonym: Cag_1479

Alternate gene names: 78189440

Gene position: 1946556-1945633 (Counterclockwise)

Preceding gene: 78189441

Following gene: 78189439

Centisome position: 75.68

GC content: 34.85

Gene sequence:

>924_bases
ATGAAAGCCCCATCAGTCAGTGTTATTTTGCCACTCTATAACCATGAGCAATATATTGACAAAACGCTTACCAGTATTTT
CGAACAGACATCTCCACCAGATGAAATCATACTAATAGATGATGGCTCTACTGATCAAGGCTTTGAAAAAGCGACACTTA
TACTGAAAAATGATCCGAGAGCTCATCTGATTCAGCAAGAAAATAAAGGTGCACACAATACGATCAATAGAGGGATAGAA
TTAGCCCGTTCAGAATTTATCGCTATCCTTAACACAGATGATCTTTTTCTTCCTTCTAAGATTGAACGCTGCAGGAACAT
AATAGAAAATTATCCAGAAATCGATTTTATATGTGGTGATATTAATATCATCGATGAAAATAGCAACATGGTAACAAGTG
GAGAGACTGTCAAGTGGCTGGAACATGCACACGATTTTCAGATGAGATGTCATTCATTAGACTTGGGTCTCCTCAACGAT
AATTATGTCACAACAACATCTAACATGTTTTTTTCAAAAAACCTATGGGAAAAAAATAAAGGGTTTCAAAATCTAAGATA
TTGCCATGACCTTGACTTTATTTTGACTGCACTTTCATCCAGTAAAGTAGTTATTGATTATAATTACAAGCATATCAACT
ACAGAACACACTCACACAATACTATCAAAGAAAAGATAAGTAAAATACGTTATGAAATGGCCGCAGTTATGGCTAATGCC
ATGATGTGTAATAATGCAATTGTTTCAAAAAGCACACTATTAGACGACATCAAAAGCTTAGGAGGTATCATTGACAAAAA
AAACAATGCGCTTCTGTTATCTGTGCTGATGACACTGAGAAGTAGGTACACTTGCAAAATACCTTATTATGAACAGTTAC
AAGAAGATGCAATAGCTGCAGAATTATACAAATTACTTAACTGA

Upstream 100 bases:

>100_bases
TAATCCTGCAAGATACATCAAGACTCGTACTAACGACCTACATTATAAAACACGATACTTTCCTTTACTCGATACCGATA
TCCAGTAAAATCATTTTTTT

Downstream 100 bases:

>100_bases
TATCTAAAAAGTGATTTTTATCAAAATTTAAGATGGACCTTATATGCTTTTATATAATAATCTATGGATATCTATTTTGT
TGATTGATAATTTTTGTTTG

Product: cell wall biosynthesis glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKAPSVSVILPLYNHEQYIDKTLTSIFEQTSPPDEIILIDDGSTDQGFEKATLILKNDPRAHLIQQENKGAHNTINRGIE
LARSEFIAILNTDDLFLPSKIERCRNIIENYPEIDFICGDINIIDENSNMVTSGETVKWLEHAHDFQMRCHSLDLGLLND
NYVTTTSNMFFSKNLWEKNKGFQNLRYCHDLDFILTALSSSKVVIDYNYKHINYRTHSHNTIKEKISKIRYEMAAVMANA
MMCNNAIVSKSTLLDDIKSLGGIIDKKNNALLLSVLMTLRSRYTCKIPYYEQLQEDAIAAELYKLLN

Sequences:

>Translated_307_residues
MKAPSVSVILPLYNHEQYIDKTLTSIFEQTSPPDEIILIDDGSTDQGFEKATLILKNDPRAHLIQQENKGAHNTINRGIE
LARSEFIAILNTDDLFLPSKIERCRNIIENYPEIDFICGDINIIDENSNMVTSGETVKWLEHAHDFQMRCHSLDLGLLND
NYVTTTSNMFFSKNLWEKNKGFQNLRYCHDLDFILTALSSSKVVIDYNYKHINYRTHSHNTIKEKISKIRYEMAAVMANA
MMCNNAIVSKSTLLDDIKSLGGIIDKKNNALLLSVLMTLRSRYTCKIPYYEQLQEDAIAAELYKLLN
>Mature_307_residues
MKAPSVSVILPLYNHEQYIDKTLTSIFEQTSPPDEIILIDDGSTDQGFEKATLILKNDPRAHLIQQENKGAHNTINRGIE
LARSEFIAILNTDDLFLPSKIERCRNIIENYPEIDFICGDINIIDENSNMVTSGETVKWLEHAHDFQMRCHSLDLGLLND
NYVTTTSNMFFSKNLWEKNKGFQNLRYCHDLDFILTALSSSKVVIDYNYKHINYRTHSHNTIKEKISKIRYEMAAVMANA
MMCNNAIVSKSTLLDDIKSLGGIIDKKNNALLLSVLMTLRSRYTCKIPYYEQLQEDAIAAELYKLLN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=40.2061855670103, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35193; Mature: 35193

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPSVSVILPLYNHEQYIDKTLTSIFEQTSPPDEIILIDDGSTDQGFEKATLILKNDPR
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCH
AHLIQQENKGAHNTINRGIELARSEFIAILNTDDLFLPSKIERCRNIIENYPEIDFICGD
HHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECC
INIIDENSNMVTSGETVKWLEHAHDFQMRCHSLDLGLLNDNYVTTTSNMFFSKNLWEKNK
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCEEECCHHHHCC
GFQNLRYCHDLDFILTALSSSKVVIDYNYKHINYRTHSHNTIKEKISKIRYEMAAVMANA
CHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
MMCNNAIVSKSTLLDDIKSLGGIIDKKNNALLLSVLMTLRSRYTCKIPYYEQLQEDAIAA
HHHCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
ELYKLLN
HHHHHHC
>Mature Secondary Structure
MKAPSVSVILPLYNHEQYIDKTLTSIFEQTSPPDEIILIDDGSTDQGFEKATLILKNDPR
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCH
AHLIQQENKGAHNTINRGIELARSEFIAILNTDDLFLPSKIERCRNIIENYPEIDFICGD
HHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECC
INIIDENSNMVTSGETVKWLEHAHDFQMRCHSLDLGLLNDNYVTTTSNMFFSKNLWEKNK
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCEEECCHHHHCC
GFQNLRYCHDLDFILTALSSSKVVIDYNYKHINYRTHSHNTIKEKISKIRYEMAAVMANA
CHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
MMCNNAIVSKSTLLDDIKSLGGIIDKKNNALLLSVLMTLRSRYTCKIPYYEQLQEDAIAA
HHHCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
ELYKLLN
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]