| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189404
Identifier: 78189404
GI number: 78189404
Start: 1910580
End: 1911404
Strand: Reverse
Name: 78189404
Synonym: Cag_1443
Alternate gene names: NA
Gene position: 1911404-1910580 (Counterclockwise)
Preceding gene: 78189415
Following gene: 78189403
Centisome position: 74.31
GC content: 41.33
Gene sequence:
>825_bases ATGGTAAAGAATAAAAAAAATGAAGTTATAGGTCGCGAAATCACTCTCTATTCTGATAAGTCCGAAGACTACATTTCATT GACCGATATGGCACGATATCGCGATACTGAACGAAGTGATTACATATTACAGAACTGGATGCGTACCAGAAGTACCATCG AGTTTATGGGGCTTTGGGAACAATTCAATAACCCCAATTTTAATTCCATCGAATTCGATGGAATTAAAAATATGGCTGGT TCCAACAGCTTTTCTCTTACACCAAAACGCTGGATTGCAGCCACCAATGCTGTAGGTGTAGTTTCCAAAACAGGTAGATA TGGTGGAACTTTTGCACATCGTGATATTGCTTTTGAATTTGCTACATGGATTAGTGCAGAGTTTAAGTTTTACCTCATTC ACGAATTCCAGCGCATCAAAGAACAAGAAACCAATCGCCAAAAACTTGACTGGAACCTTCAACGTACCCTTGCAAAAATC AATTACACTATTCATACTGACGCTATCAAAGAACGACTGATTCCCGAAAAGCTGACTGCCAAACAAACGTCATTGGTTTA TGCTTCGGAAGCGGATTTGCTTAATATGGCGCTCTTTGGAACAACAGCAGCCGACTGGCATACTGAAAATCCGAATGCTA AAGGTAACTTACGGGATGATGCTACATTGGAACAATTGGTGGTGCTCTCCAACCTCGAAAGCATCAACGCCGTGCTGATC CGTCAAGGGCTCACACAATCGGAACGACTGATGCAACTCAACCAGATTGCCATTACCCAAATGACCTCTTTGGTTAAGAA TGCGCATTTGAAAAAGATGCAATGA
Upstream 100 bases:
>100_bases GGATGGTTGGAAATTTTTTAGGAGTTGCATAAAGGTAATACAAGCAGGCTAAAAAGGTAACGGATTTTTTTCGTCATTGA AGAGGTTGGTCATCAAGAAT
Downstream 100 bases:
>100_bases GTGAGAATGGATGTTACATCATGCTCGTTTTGCAAGAAAGGATTTTTTGCTACATTTTTAACACATAATGCTTGCAAGAA AAAGTGTTATTAACTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MVKNKKNEVIGREITLYSDKSEDYISLTDMARYRDTERSDYILQNWMRTRSTIEFMGLWEQFNNPNFNSIEFDGIKNMAG SNSFSLTPKRWIAATNAVGVVSKTGRYGGTFAHRDIAFEFATWISAEFKFYLIHEFQRIKEQETNRQKLDWNLQRTLAKI NYTIHTDAIKERLIPEKLTAKQTSLVYASEADLLNMALFGTTAADWHTENPNAKGNLRDDATLEQLVVLSNLESINAVLI RQGLTQSERLMQLNQIAITQMTSLVKNAHLKKMQ
Sequences:
>Translated_274_residues MVKNKKNEVIGREITLYSDKSEDYISLTDMARYRDTERSDYILQNWMRTRSTIEFMGLWEQFNNPNFNSIEFDGIKNMAG SNSFSLTPKRWIAATNAVGVVSKTGRYGGTFAHRDIAFEFATWISAEFKFYLIHEFQRIKEQETNRQKLDWNLQRTLAKI NYTIHTDAIKERLIPEKLTAKQTSLVYASEADLLNMALFGTTAADWHTENPNAKGNLRDDATLEQLVVLSNLESINAVLI RQGLTQSERLMQLNQIAITQMTSLVKNAHLKKMQ >Mature_274_residues MVKNKKNEVIGREITLYSDKSEDYISLTDMARYRDTERSDYILQNWMRTRSTIEFMGLWEQFNNPNFNSIEFDGIKNMAG SNSFSLTPKRWIAATNAVGVVSKTGRYGGTFAHRDIAFEFATWISAEFKFYLIHEFQRIKEQETNRQKLDWNLQRTLAKI NYTIHTDAIKERLIPEKLTAKQTSLVYASEADLLNMALFGTTAADWHTENPNAKGNLRDDATLEQLVVLSNLESINAVLI RQGLTQSERLMQLNQIAITQMTSLVKNAHLKKMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31601; Mature: 31601
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNKKNEVIGREITLYSDKSEDYISLTDMARYRDTERSDYILQNWMRTRSTIEFMGLWE CCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QFNNPNFNSIEFDGIKNMAGSNSFSLTPKRWIAATNAVGVVSKTGRYGGTFAHRDIAFEF HHCCCCCCEEEECCHHHCCCCCCCCCCHHHHHEECCCCEEEECCCCCCCCCHHHHHHHHH ATWISAEFKFYLIHEFQRIKEQETNRQKLDWNLQRTLAKINYTIHTDAIKERLIPEKLTA HHHHHHCCEEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHEEEEEHHHHHHHCCCHHHHH KQTSLVYASEADLLNMALFGTTAADWHTENPNAKGNLRDDATLEQLVVLSNLESINAVLI HHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH RQGLTQSERLMQLNQIAITQMTSLVKNAHLKKMQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKNKKNEVIGREITLYSDKSEDYISLTDMARYRDTERSDYILQNWMRTRSTIEFMGLWE CCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QFNNPNFNSIEFDGIKNMAGSNSFSLTPKRWIAATNAVGVVSKTGRYGGTFAHRDIAFEF HHCCCCCCEEEECCHHHCCCCCCCCCCHHHHHEECCCCEEEECCCCCCCCCHHHHHHHHH ATWISAEFKFYLIHEFQRIKEQETNRQKLDWNLQRTLAKINYTIHTDAIKERLIPEKLTA HHHHHHCCEEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHEEEEEHHHHHHHCCCHHHHH KQTSLVYASEADLLNMALFGTTAADWHTENPNAKGNLRDDATLEQLVVLSNLESINAVLI HHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH RQGLTQSERLMQLNQIAITQMTSLVKNAHLKKMQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA