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The map label for this gene is ypjH [H]

Identifier: 78189259

GI number: 78189259

Start: 1757917

End: 1759056

Strand: Reverse

Name: ypjH [H]

Synonym: Cag_1294

Alternate gene names: 78189259

Gene position: 1759056-1757917 (Counterclockwise)

Preceding gene: 78189260

Following gene: 78189255

Centisome position: 68.39

GC content: 46.4

Gene sequence:

>1140_bases
ATGCGTTTCATGAAAATCGGGATTGCCTGCCATCATACTTATGGTGGCAGTGGCGCTATTGCAACTGAGCTTGGTAAAGC
GCTTGCGGCGCGAGGGCATCATGTGCACTTTTTTGGTAAAGAAGCGCCCTTTAAGCTTGGTGCTTTTGTGCGCAACATTT
TTTACCATGAAGTAGAGGTTATGCACTATCCGCTTTTTGATTCTCCCTTTTACTCGCTTGCCCTTGCCTCTAAAATTGCT
GAAGTGGCGTTTTATGAAAAGCTTGATATTGTTCACGCCCATTATGCTATTCCCCATGCGTTGAGCGCAATGCTTGCCTT
GCAAATGCTCGAAGATAAGTGTGCTGCAGCTCACTGCTTTAAGTTAGTTACCACCTTACATGGCACCGATATTACGGTGG
TTGGGGCTGACCGTTCGATGCAGGATGTGGTGCGCCTTGCTATCAATAAATCGCATGGTGTAACAGCGGTGTCACATTTT
TTAAAGGAAGAAACAGTGCGGATGTTTCAGCCTAAGCGCGACATTGCGGTTATCCATAATTTTGTGGATACTCAGCTTTT
TAGCCGAATGGCAGCAGGGGATATTCGTGAGCAGCTTGGGTTGGGGAGTGAGAAAATTGTGATTCACATCTCTAATTTTC
GTCCAGTGAAGTGCATTGGCGATATTATTGCTATTTTTCAAGCTATAGCGACTGAAAGCAATGCAACGTTGTTGTTGGTT
GGCGATGGTCCTGAGCGGAGTGAGGCAGAGTTGCTCGTGCGGCAGTTGGGTTTGTGCTCGCGTGTGCGTTTTCTTGGTAA
GTTACTCGATATTGTGCCGTTACTTTCTCTTGCCGATGTAATGCTTATGCCAAGCAATGTTGAGTCGTTTGGGCTTGCAG
CTTTGGAAGCTATGGCGTGCGGTGTGCCAATTATTGCCACCAACGTTGGCGGTTTTCCTGAGTTTATTGAGTCAGGCAAG
CATGGTTACTTATTGCCACCGGGTGATGTTGCGGCTATGACGGAAAAAGCGCTGCATCTTTTGAACAATCCTGATGAGTG
GCAGCGCATTTCAATGGCGTGTGTTAAGCAAGCGGCTTGTTTTAATGTTTCGCGTTTAGTGGAGCAGTATGAAAAGTATT
ATACGAAGCTTATGGGGTAA

Upstream 100 bases:

>100_bases
CTTCGATGTTGTTATTGAGTAGTTGTTGGAATATTCTCTCGTGCAAGAGAGCTTCTGTGCTGAAAGCTCTATATTGAAGA
AATGTAACTCTACAACTCTT

Downstream 100 bases:

>100_bases
AGGATGGGTGTAACTTATAAAAGCACGTCCCAATATCCTTCTTTTCGACTTCCCATTCGTCGTAACCATCCATTATGCTG
TAGTTTCTGAATGTTGCGCT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRFMKIGIACHHTYGGSGAIATELGKALAARGHHVHFFGKEAPFKLGAFVRNIFYHEVEVMHYPLFDSPFYSLALASKIA
EVAFYEKLDIVHAHYAIPHALSAMLALQMLEDKCAAAHCFKLVTTLHGTDITVVGADRSMQDVVRLAINKSHGVTAVSHF
LKEETVRMFQPKRDIAVIHNFVDTQLFSRMAAGDIREQLGLGSEKIVIHISNFRPVKCIGDIIAIFQAIATESNATLLLV
GDGPERSEAELLVRQLGLCSRVRFLGKLLDIVPLLSLADVMLMPSNVESFGLAALEAMACGVPIIATNVGGFPEFIESGK
HGYLLPPGDVAAMTEKALHLLNNPDEWQRISMACVKQAACFNVSRLVEQYEKYYTKLMG

Sequences:

>Translated_379_residues
MRFMKIGIACHHTYGGSGAIATELGKALAARGHHVHFFGKEAPFKLGAFVRNIFYHEVEVMHYPLFDSPFYSLALASKIA
EVAFYEKLDIVHAHYAIPHALSAMLALQMLEDKCAAAHCFKLVTTLHGTDITVVGADRSMQDVVRLAINKSHGVTAVSHF
LKEETVRMFQPKRDIAVIHNFVDTQLFSRMAAGDIREQLGLGSEKIVIHISNFRPVKCIGDIIAIFQAIATESNATLLLV
GDGPERSEAELLVRQLGLCSRVRFLGKLLDIVPLLSLADVMLMPSNVESFGLAALEAMACGVPIIATNVGGFPEFIESGK
HGYLLPPGDVAAMTEKALHLLNNPDEWQRISMACVKQAACFNVSRLVEQYEKYYTKLMG
>Mature_379_residues
MRFMKIGIACHHTYGGSGAIATELGKALAARGHHVHFFGKEAPFKLGAFVRNIFYHEVEVMHYPLFDSPFYSLALASKIA
EVAFYEKLDIVHAHYAIPHALSAMLALQMLEDKCAAAHCFKLVTTLHGTDITVVGADRSMQDVVRLAINKSHGVTAVSHF
LKEETVRMFQPKRDIAVIHNFVDTQLFSRMAAGDIREQLGLGSEKIVIHISNFRPVKCIGDIIAIFQAIATESNATLLLV
GDGPERSEAELLVRQLGLCSRVRFLGKLLDIVPLLSLADVMLMPSNVESFGLAALEAMACGVPIIATNVGGFPEFIESGK
HGYLLPPGDVAAMTEKALHLLNNPDEWQRISMACVKQAACFNVSRLVEQYEKYYTKLMG

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24654571, Length=334, Percent_Identity=24.251497005988, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41666; Mature: 41666

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMKIGIACHHTYGGSGAIATELGKALAARGHHVHFFGKEAPFKLGAFVRNIFYHEVEV
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
MHYPLFDSPFYSLALASKIAEVAFYEKLDIVHAHYAIPHALSAMLALQMLEDKCAAAHCF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVTTLHGTDITVVGADRSMQDVVRLAINKSHGVTAVSHFLKEETVRMFQPKRDIAVIHN
HHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
FVDTQLFSRMAAGDIREQLGLGSEKIVIHISNFRPVKCIGDIIAIFQAIATESNATLLLV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
GDGPERSEAELLVRQLGLCSRVRFLGKLLDIVPLLSLADVMLMPSNVESFGLAALEAMAC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GVPIIATNVGGFPEFIESGKHGYLLPPGDVAAMTEKALHLLNNPDEWQRISMACVKQAAC
CCCEEEECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FNVSRLVEQYEKYYTKLMG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFMKIGIACHHTYGGSGAIATELGKALAARGHHVHFFGKEAPFKLGAFVRNIFYHEVEV
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
MHYPLFDSPFYSLALASKIAEVAFYEKLDIVHAHYAIPHALSAMLALQMLEDKCAAAHCF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVTTLHGTDITVVGADRSMQDVVRLAINKSHGVTAVSHFLKEETVRMFQPKRDIAVIHN
HHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
FVDTQLFSRMAAGDIREQLGLGSEKIVIHISNFRPVKCIGDIIAIFQAIATESNATLLLV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
GDGPERSEAELLVRQLGLCSRVRFLGKLLDIVPLLSLADVMLMPSNVESFGLAALEAMAC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GVPIIATNVGGFPEFIESGKHGYLLPPGDVAAMTEKALHLLNNPDEWQRISMACVKQAAC
CCCEEEECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FNVSRLVEQYEKYYTKLMG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]