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The map label for this gene is ygeR [C]

Identifier: 78189247

GI number: 78189247

Start: 1744799

End: 1746310

Strand: Reverse

Name: ygeR [C]

Synonym: Cag_1281

Alternate gene names: 78189247

Gene position: 1746310-1744799 (Counterclockwise)

Preceding gene: 78189249

Following gene: 78189246

Centisome position: 67.89

GC content: 49.21

Gene sequence:

>1512_bases
ATGGCGCTGTTTGGTTGTTTGCGCTGTTTGGTTGTTCCCTTGTGGTTGGTTGGTGGACTTTTGGTTTCATTCCCCCTTAC
TATAGCGGAGGCTGCGCCCTCATCATCAAGGCATACGGCAACTATTGCGCGTATTTCAAAGGAGCGAGCGGCTGTAGAGG
CAAATTTGCGAAGCTTAAAGCAGCAGTTGCAGGAGTATCAAACTCGTTTAACGCAAGTGTCGCGCAAAGAGGCGCAATCG
TTTAAAGCGTTGGAAGCAATTCGTGGCAAAATTACGGTGCTTGAAAAAATGATTACCGATAATCAACGCTATCTCGCCGA
GTTAGATGCTGATATTGATCATCTTCAAAATGAGTTAGAAGGGAATCGGCAGGTGTATGGGCAGTTGTCGGATGATTTTC
GGCGGACGGCAATTTCGGTTTATAAGTATGGTGGAAATCGTGATGTGGAGCATATTTTTGGTGCATCGTCGGTAAATGAT
GCCTTAGTGCGGGCGCAATATATGGGCTTTTTTACGCGAGCGGTTAGCCACAATGTGAATGAGTTGCAAGCGGCAGCCGT
GCGTCTTGAGGAGAATCGTGAAGCGTTGGAGCAGACGTATGAGCAAAAAATGGCGATGGTAAAAGAGCAGGAGCGGCAGT
TGCAGCAGTGGTCGGCAAGCAAAAAAGAGAAGGAGCAGGTGCTTGTAACGCTGAAGAAAAATAAGCAGGAGTATTCGAAA
CAGTTATCCATTGCACAAAAAAAGCGTCAGCAATTGCAAGCGCGTATTGAAGGATTAATTATTGCAGAGCAGCGTGCAAT
TGAGGCGGAAATGGAACGTCAGCGCAAGCTTGCTGAAGCGCGTCGGGTGGCAGCGGAAAAACGGGCGCGTGAACGTGCTG
AGGCGGAGCGTCGAGCTGCTGCACAGCGTGAAGCTGAGCGATTAGCCGCAGAGCGTCAGGCAAAAGCACGGGCGGCGGCT
GAAGGCAAAAAAGCATCAAGAAGTAAGCAAGAAAAAGAGGAGGTAGCTCTGAAGCCAGCTCCATCTGTTACCAAGCCACT
CCCTGCTGAACCGCAACGTCGGGAAGAGCCGATAGTGGAGGAGGCTGACGAGTTGGCAGCTATTTCCGTCAATTTTGATA
AAGCGTATGGTTCGCTTCCTTTGCCTGTGCAAGGTGGTGTGGTAACGCGTCGGTTTGGCTCGGTTCACGATAAAGATTTA
AACATTGTAACCACCAGCAACGGTATTGATATTTCGGTGCCAGCAGGTACGCCTGTTCGGGCGGTTTCGGGCGGCAAGGT
GGTGCAAATTGCCTTTTTACCCACCTTTGGCAACATTGTGATTCTTCGTCATACCAATTCGTACCTCACGGTGTATGCTA
ACCTTGGCTCGTTGCAGGTGGCAAAAAATGAGGTGGTGAAGTCGCAACAACAACTTGGTGTGGTTGGAAAATCAAGCGAT
GGGGCATCAATGCTTCATTTTGAAATTTGGAAAGGGCGTACTAAGCAAAATCCCGCAAAATGGTTGCGGTAA

Upstream 100 bases:

>100_bases
TTTTTGGCTTTTTTGATTGTTCTGTTTGATAACATGAGGAGTTATTTCCTCACATTGAGAATTGCTTGTGTTTTTTTCAT
TGCATAAAAAAGAGAAAGGT

Downstream 100 bases:

>100_bases
AAGGTATCTCTCACAATTTATTGCCGTTATGGATATTAAAGCTATAGCACAAGCTCTTGGCATGGCTATTTTTCGCTACC
CCGCCTTGTGGCGCAAACTG

Product: membrane-bound metallopeptidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MALFGCLRCLVVPLWLVGGLLVSFPLTIAEAAPSSSRHTATIARISKERAAVEANLRSLKQQLQEYQTRLTQVSRKEAQS
FKALEAIRGKITVLEKMITDNQRYLAELDADIDHLQNELEGNRQVYGQLSDDFRRTAISVYKYGGNRDVEHIFGASSVND
ALVRAQYMGFFTRAVSHNVNELQAAAVRLEENREALEQTYEQKMAMVKEQERQLQQWSASKKEKEQVLVTLKKNKQEYSK
QLSIAQKKRQQLQARIEGLIIAEQRAIEAEMERQRKLAEARRVAAEKRARERAEAERRAAAQREAERLAAERQAKARAAA
EGKKASRSKQEKEEVALKPAPSVTKPLPAEPQRREEPIVEEADELAAISVNFDKAYGSLPLPVQGGVVTRRFGSVHDKDL
NIVTTSNGIDISVPAGTPVRAVSGGKVVQIAFLPTFGNIVILRHTNSYLTVYANLGSLQVAKNEVVKSQQQLGVVGKSSD
GASMLHFEIWKGRTKQNPAKWLR

Sequences:

>Translated_503_residues
MALFGCLRCLVVPLWLVGGLLVSFPLTIAEAAPSSSRHTATIARISKERAAVEANLRSLKQQLQEYQTRLTQVSRKEAQS
FKALEAIRGKITVLEKMITDNQRYLAELDADIDHLQNELEGNRQVYGQLSDDFRRTAISVYKYGGNRDVEHIFGASSVND
ALVRAQYMGFFTRAVSHNVNELQAAAVRLEENREALEQTYEQKMAMVKEQERQLQQWSASKKEKEQVLVTLKKNKQEYSK
QLSIAQKKRQQLQARIEGLIIAEQRAIEAEMERQRKLAEARRVAAEKRARERAEAERRAAAQREAERLAAERQAKARAAA
EGKKASRSKQEKEEVALKPAPSVTKPLPAEPQRREEPIVEEADELAAISVNFDKAYGSLPLPVQGGVVTRRFGSVHDKDL
NIVTTSNGIDISVPAGTPVRAVSGGKVVQIAFLPTFGNIVILRHTNSYLTVYANLGSLQVAKNEVVKSQQQLGVVGKSSD
GASMLHFEIWKGRTKQNPAKWLR
>Mature_502_residues
ALFGCLRCLVVPLWLVGGLLVSFPLTIAEAAPSSSRHTATIARISKERAAVEANLRSLKQQLQEYQTRLTQVSRKEAQSF
KALEAIRGKITVLEKMITDNQRYLAELDADIDHLQNELEGNRQVYGQLSDDFRRTAISVYKYGGNRDVEHIFGASSVNDA
LVRAQYMGFFTRAVSHNVNELQAAAVRLEENREALEQTYEQKMAMVKEQERQLQQWSASKKEKEQVLVTLKKNKQEYSKQ
LSIAQKKRQQLQARIEGLIIAEQRAIEAEMERQRKLAEARRVAAEKRARERAEAERRAAAQREAERLAAERQAKARAAAE
GKKASRSKQEKEEVALKPAPSVTKPLPAEPQRREEPIVEEADELAAISVNFDKAYGSLPLPVQGGVVTRRFGSVHDKDLN
IVTTSNGIDISVPAGTPVRAVSGGKVVQIAFLPTFGNIVILRHTNSYLTVYANLGSLQVAKNEVVKSQQQLGVVGKSSDG
ASMLHFEIWKGRTKQNPAKWLR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=39.1752577319588, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 56229; Mature: 56098

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFGCLRCLVVPLWLVGGLLVSFPLTIAEAAPSSSRHTATIARISKERAAVEANLRSLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQLQEYQTRLTQVSRKEAQSFKALEAIRGKITVLEKMITDNQRYLAELDADIDHLQNELE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHC
GNRQVYGQLSDDFRRTAISVYKYGGNRDVEHIFGASSVNDALVRAQYMGFFTRAVSHNVN
CCHHHHCCHHHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH
ELQAAAVRLEENREALEQTYEQKMAMVKEQERQLQQWSASKKEKEQVLVTLKKNKQEYSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHHHHHH
QLSIAQKKRQQLQARIEGLIIAEQRAIEAEMERQRKLAEARRVAAEKRARERAEAERRAA
HHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQREAERLAAERQAKARAAAEGKKASRSKQEKEEVALKPAPSVTKPLPAEPQRREEPIVE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
EADELAAISVNFDKAYGSLPLPVQGGVVTRRFGSVHDKDLNIVTTSNGIDISVPAGTPVR
HHHHHEEEEEEEHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEE
AVSGGKVVQIAFLPTFGNIVILRHTNSYLTVYANLGSLQVAKNEVVKSQQQLGVVGKSSD
EECCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCEECCCC
GASMLHFEIWKGRTKQNPAKWLR
CCEEEEEEECCCCCCCCHHHHCC
>Mature Secondary Structure 
ALFGCLRCLVVPLWLVGGLLVSFPLTIAEAAPSSSRHTATIARISKERAAVEANLRSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQLQEYQTRLTQVSRKEAQSFKALEAIRGKITVLEKMITDNQRYLAELDADIDHLQNELE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHC
GNRQVYGQLSDDFRRTAISVYKYGGNRDVEHIFGASSVNDALVRAQYMGFFTRAVSHNVN
CCHHHHCCHHHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH
ELQAAAVRLEENREALEQTYEQKMAMVKEQERQLQQWSASKKEKEQVLVTLKKNKQEYSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHHHHHH
QLSIAQKKRQQLQARIEGLIIAEQRAIEAEMERQRKLAEARRVAAEKRARERAEAERRAA
HHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQREAERLAAERQAKARAAAEGKKASRSKQEKEEVALKPAPSVTKPLPAEPQRREEPIVE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
EADELAAISVNFDKAYGSLPLPVQGGVVTRRFGSVHDKDLNIVTTSNGIDISVPAGTPVR
HHHHHEEEEEEEHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEE
AVSGGKVVQIAFLPTFGNIVILRHTNSYLTVYANLGSLQVAKNEVVKSQQQLGVVGKSSD
EECCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCEECCCC
GASMLHFEIWKGRTKQNPAKWLR
CCEEEEEEECCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]