| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189206
Identifier: 78189206
GI number: 78189206
Start: 1653350
End: 1654354
Strand: Reverse
Name: 78189206
Synonym: Cag_1240
Alternate gene names: NA
Gene position: 1654354-1653350 (Counterclockwise)
Preceding gene: 78189207
Following gene: 78189205
Centisome position: 64.32
GC content: 38.31
Gene sequence:
>1005_bases ATGAATCACGGTTCAAGAAGGGATGTTGCAATAATAATTCAAAATCAAAAATTTAAAATCCATAATCATTATCAAATGGC ACGTACCTTAATCAGCTTTGATTGGGCAATGAAGCGCTTGCTTCGTAGTAAAGCCAATTTCGATATTTTAGAAGGCTTTC TTAGTGAGCTACTTGGCGAGGATATCACCATTCTTGATATTCTTGAAAGCGAAAGCAATAAAGAGAACAAGAGTGGTAAA TTCAACCGAGTTGATTTAAAAGTAAAGAACAGTAAGGGCGAGTTTATCATTATTGAGTTACAGTACGATAGAGAGTACGA TTATTTGCAACGAATGTTGTATGGTACATCGCGTGTAATTACTGAGCATCAAAAAGAGAGTGAGAGTTATGATACCGTAG TGAAGGTTATTTCCGTAAACATCCTTTATTTTGAGCTTGGTCAAGGTACCGACTACGTCTATCACGGTAAAACAAGCTTT GTAGGTATTCACGATCATGATACGTTACAGCTTGATAGTCGTCAAAAAGAGAGGTTTGGCAAGCTACAAATTCACAGCCT TTATCCCGAATATTACATTATTCGCATCAACAACTTTGATAGTATAGCACGCAATACACTTGATGAGTGGATATATTTTT TGAAAAACTCTGAAATCCCTGATAACTTTAAAGCAAAAGGCATACAAAAAGCTAAAGAATCCTTTTCGGTATTACGCATG TCGGTGGAGGAATATCAAGCGTATCAAGCTTTTCAAGATGAGCTGCGTGATGAGGCAAGCTATGTAGAAACAAAACGTAT TGATGCTTTATATCAAGGGCGAGAGGAAGGATTTGCTGAAGGTATGGAGAAAGGCAAGGAGATAGGCGTTCTTGAAGGCA TGGAGAAAGGCAAAGAAATTGGGGTTCTCGAGGGCAAACTTGAAATTGCTCGGCGACTTCTTGCAAGCGGCATAAGCAAG AAAGAGGTTGCTGCAATTACAGGTATTACCGTTGATTTGTTGTAG
Upstream 100 bases:
>100_bases TTGTAGGGGCAATCCCTTGCGGTTGCCCCAAAAGGCGGGGAAAATTGTAAAGACAAGGCATGCCTTGTCTTTACTTTATC ATGGTAATCCTATACATTCC
Downstream 100 bases:
>100_bases AGGCAAACCCTTGCGGTTGCCCTGTTGTCTGTGCCGTTATTTTCGTCTCCTCTCTTTTCAACATTTTTTGTACATTCAAA AAGCTTATTAGATAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNHGSRRDVAIIIQNQKFKIHNHYQMARTLISFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNKENKSGK FNRVDLKVKNSKGEFIIIELQYDREYDYLQRMLYGTSRVITEHQKESESYDTVVKVISVNILYFELGQGTDYVYHGKTSF VGIHDHDTLQLDSRQKERFGKLQIHSLYPEYYIIRINNFDSIARNTLDEWIYFLKNSEIPDNFKAKGIQKAKESFSVLRM SVEEYQAYQAFQDELRDEASYVETKRIDALYQGREEGFAEGMEKGKEIGVLEGMEKGKEIGVLEGKLEIARRLLASGISK KEVAAITGITVDLL
Sequences:
>Translated_334_residues MNHGSRRDVAIIIQNQKFKIHNHYQMARTLISFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNKENKSGK FNRVDLKVKNSKGEFIIIELQYDREYDYLQRMLYGTSRVITEHQKESESYDTVVKVISVNILYFELGQGTDYVYHGKTSF VGIHDHDTLQLDSRQKERFGKLQIHSLYPEYYIIRINNFDSIARNTLDEWIYFLKNSEIPDNFKAKGIQKAKESFSVLRM SVEEYQAYQAFQDELRDEASYVETKRIDALYQGREEGFAEGMEKGKEIGVLEGMEKGKEIGVLEGKLEIARRLLASGISK KEVAAITGITVDLL >Mature_334_residues MNHGSRRDVAIIIQNQKFKIHNHYQMARTLISFDWAMKRLLRSKANFDILEGFLSELLGEDITILDILESESNKENKSGK FNRVDLKVKNSKGEFIIIELQYDREYDYLQRMLYGTSRVITEHQKESESYDTVVKVISVNILYFELGQGTDYVYHGKTSF VGIHDHDTLQLDSRQKERFGKLQIHSLYPEYYIIRINNFDSIARNTLDEWIYFLKNSEIPDNFKAKGIQKAKESFSVLRM SVEEYQAYQAFQDELRDEASYVETKRIDALYQGREEGFAEGMEKGKEIGVLEGMEKGKEIGVLEGKLEIARRLLASGISK KEVAAITGITVDLL
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38717; Mature: 38717
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHGSRRDVAIIIQNQKFKIHNHYQMARTLISFDWAMKRLLRSKANFDILEGFLSELLGE CCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC DITILDILESESNKENKSGKFNRVDLKVKNSKGEFIIIELQYDREYDYLQRMLYGTSRVI CEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHH TEHQKESESYDTVVKVISVNILYFELGQGTDYVYHGKTSFVGIHDHDTLQLDSRQKERFG HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCEEEEEECCCCCEEECCHHHHHHC KLQIHSLYPEYYIIRINNFDSIARNTLDEWIYFLKNSEIPDNFKAKGIQKAKESFSVLRM CEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SVEEYQAYQAFQDELRDEASYVETKRIDALYQGREEGFAEGMEKGKEIGVLEGMEKGKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCC GVLEGKLEIARRLLASGISKKEVAAITGITVDLL CEEHHHHHHHHHHHHCCCCHHHHHEEECEEEEEC >Mature Secondary Structure MNHGSRRDVAIIIQNQKFKIHNHYQMARTLISFDWAMKRLLRSKANFDILEGFLSELLGE CCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC DITILDILESESNKENKSGKFNRVDLKVKNSKGEFIIIELQYDREYDYLQRMLYGTSRVI CEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHH TEHQKESESYDTVVKVISVNILYFELGQGTDYVYHGKTSFVGIHDHDTLQLDSRQKERFG HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCEEEEEECCCCCEEECCHHHHHHC KLQIHSLYPEYYIIRINNFDSIARNTLDEWIYFLKNSEIPDNFKAKGIQKAKESFSVLRM CEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SVEEYQAYQAFQDELRDEASYVETKRIDALYQGREEGFAEGMEKGKEIGVLEGMEKGKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCC GVLEGKLEIARRLLASGISKKEVAAITGITVDLL CEEHHHHHHHHHHHHCCCCHHHHHEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA