Click here to switch to the map view.

The map label for this gene is 78189133

Identifier: 78189133

GI number: 78189133

Start: 1561050

End: 1561901

Strand: Reverse

Name: 78189133

Synonym: Cag_1166

Alternate gene names: NA

Gene position: 1561901-1561050 (Counterclockwise)

Preceding gene: 78189137

Following gene: 78189132

Centisome position: 60.73

GC content: 40.85

Gene sequence:

>852_bases
GTGCAGAAGTTTTTTACCCTTTTGATAAAGTACAATGCGTACCTACTGCTTGCTCTTTACTGTAGTATTGCATTATTGGT
TATAAAACTTCAGGAAGAGGAGATTTTTGTTGAGTTGCGTAATAACGGCTTAGAGTTTAGTGCGGCTGTTAATGAGCAAT
TTATGAGCATTGCCTACTTCTTACATTTAAGCCATGAAAATAGTCGCTTGATGCGCTTGAATACCGATTTGCTCAACAAA
ATTCTTCATTACGATAACATTTTGCTTGAAGAACGTCGCTATAAAGCACTCTTTAGCGATTCAACCTTTAATGCTTCGCC
TTACATTAAAGCTCAAGTGGTTGATCGCAAATTTAGTGCCACCGATAATATGCTTATTATTGATTCGGGCTGGCGGCATG
GGGTAAAAAAGGATATGGCTGTGCTTGTGCCGCAAGGTCTTGTAGGGCGCGTGGTTGCTGTATCTGAAAATTATGCAAAA
GTGATGCCTGTTATTCATCCCGATTTTAGGGTGTGTGTGGTTGCTGATTCATCAAATTGTAGTGGTATTCTTGTGTGGAA
TGGTGGGCGTGAGTGGATTGCCAATGTTGATCATATTCCTATTAGTAGCCGTTTGCGTTTAAATGAGCAATTTCGCACGG
CTGATTTTAGCACCTTTGCTTTGCGTGGAATTCCTGTTGGGCGCATTGTGCGTATTGTGCCCGATAAGTTGTTTTACACG
GTTGATGTTCGCTTAGCTGTTGATTTTTCTGCATTGCATTATGTGTTGGTTGCCCCTCAAAAAGTTGAAGCTGAAAAAGT
TCGCATAGTAAGCGATAGTAGTGCTGCTCTGTTACGTACTCCACAATTGTAA

Upstream 100 bases:

>100_bases
ATAACATTAGTAAGGCTTCTTTGCTCTGAAAGCAATATCTTCCCTCTGTATTTTCCTACTGAAACCCAGAAAAGCGCAAT
ATAAAAACGGAACAGCAACC

Downstream 100 bases:

>100_bases
AGATGCCTTAAAGCTGTGCCACTAAAACCTCATTTTACCATTATTGGGCTGTTGGGTGTAGCCGTGTTGGTGCAAGAATT
TGCCCTTAACCGCTTGACGT

Product: rod shape-determining protein MreC

Products: NA

Alternate protein names: Cell Shape-Determining Protein MreC; Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQKFFTLLIKYNAYLLLALYCSIALLVIKLQEEEIFVELRNNGLEFSAAVNEQFMSIAYFLHLSHENSRLMRLNTDLLNK
ILHYDNILLEERRYKALFSDSTFNASPYIKAQVVDRKFSATDNMLIIDSGWRHGVKKDMAVLVPQGLVGRVVAVSENYAK
VMPVIHPDFRVCVVADSSNCSGILVWNGGREWIANVDHIPISSRLRLNEQFRTADFSTFALRGIPVGRIVRIVPDKLFYT
VDVRLAVDFSALHYVLVAPQKVEAEKVRIVSDSSAALLRTPQL

Sequences:

>Translated_283_residues
MQKFFTLLIKYNAYLLLALYCSIALLVIKLQEEEIFVELRNNGLEFSAAVNEQFMSIAYFLHLSHENSRLMRLNTDLLNK
ILHYDNILLEERRYKALFSDSTFNASPYIKAQVVDRKFSATDNMLIIDSGWRHGVKKDMAVLVPQGLVGRVVAVSENYAK
VMPVIHPDFRVCVVADSSNCSGILVWNGGREWIANVDHIPISSRLRLNEQFRTADFSTFALRGIPVGRIVRIVPDKLFYT
VDVRLAVDFSALHYVLVAPQKVEAEKVRIVSDSSAALLRTPQL
>Mature_283_residues
MQKFFTLLIKYNAYLLLALYCSIALLVIKLQEEEIFVELRNNGLEFSAAVNEQFMSIAYFLHLSHENSRLMRLNTDLLNK
ILHYDNILLEERRYKALFSDSTFNASPYIKAQVVDRKFSATDNMLIIDSGWRHGVKKDMAVLVPQGLVGRVVAVSENYAK
VMPVIHPDFRVCVVADSSNCSGILVWNGGREWIANVDHIPISSRLRLNEQFRTADFSTFALRGIPVGRIVRIVPDKLFYT
VDVRLAVDFSALHYVLVAPQKVEAEKVRIVSDSSAALLRTPQL

Specific function: Unknown

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32179; Mature: 32179

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFFTLLIKYNAYLLLALYCSIALLVIKLQEEEIFVELRNNGLEFSAAVNEQFMSIAYF
CCHHEEEEHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCEEEEEHHHHHHHEEEEE
LHLSHENSRLMRLNTDLLNKILHYDNILLEERRYKALFSDSTFNASPYIKAQVVDRKFSA
EEEECCCCEEEEECHHHHHHHHHHCCCEEHHHHHHEEECCCCCCCCCEEEEEEECCCCCC
TDNMLIIDSGWRHGVKKDMAVLVPQGLVGRVVAVSENYAKVMPVIHPDFRVCVVADSSNC
CCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCEEECEEECCCEEEEEEECCCCC
SGILVWNGGREWIANVDHIPISSRLRLNEQFRTADFSTFALRGIPVGRIVRIVPDKLFYT
CEEEEECCCHHHCCCCCCCCCCCCEEECCHHCCCCCCEEEECCCCHHHEEEEECCCEEEE
VDVRLAVDFSALHYVLVAPQKVEAEKVRIVSDSSAALLRTPQL
EEEEEEEEHHHEEEEEECCCCCCCCEEEEEECCCCEEEECCCC
>Mature Secondary Structure
MQKFFTLLIKYNAYLLLALYCSIALLVIKLQEEEIFVELRNNGLEFSAAVNEQFMSIAYF
CCHHEEEEHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCEEEEEHHHHHHHEEEEE
LHLSHENSRLMRLNTDLLNKILHYDNILLEERRYKALFSDSTFNASPYIKAQVVDRKFSA
EEEECCCCEEEEECHHHHHHHHHHCCCEEHHHHHHEEECCCCCCCCCEEEEEEECCCCCC
TDNMLIIDSGWRHGVKKDMAVLVPQGLVGRVVAVSENYAKVMPVIHPDFRVCVVADSSNC
CCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCEEECEEECCCEEEEEEECCCCC
SGILVWNGGREWIANVDHIPISSRLRLNEQFRTADFSTFALRGIPVGRIVRIVPDKLFYT
CEEEEECCCHHHCCCCCCCCCCCCEEECCHHCCCCCCEEEECCCCHHHEEEEECCCEEEE
VDVRLAVDFSALHYVLVAPQKVEAEKVRIVSDSSAALLRTPQL
EEEEEEEEHHHEEEEEECCCCCCCCEEEEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA