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The map label for this gene is 78189043

Identifier: 78189043

GI number: 78189043

Start: 1458376

End: 1459218

Strand: Reverse

Name: 78189043

Synonym: Cag_1076

Alternate gene names: NA

Gene position: 1459218-1458376 (Counterclockwise)

Preceding gene: 78189044

Following gene: 78189040

Centisome position: 56.73

GC content: 45.31

Gene sequence:

>843_bases
ATGTCAACAATAACCAGACCAATGACCACCATGATCCTCAAGCAGCGCTTTCCATTCCGCTTCGGAACAAGTTCCTACAT
CATCCCTGCCGATATTATTCCTAATGTAGAATATCTTAAAGATAAGGTTGATGATATTGAGCTGGTACTTTTTGAGTCTG
ATGAATTCAGCAATTTGCCCTCCGCCGAAGATATTCAAACCTTAAAGCAACTTGCTGAAGAGTGGGCGCTTACTTATTGC
GTCCATCTGCCGCTTGACGTTTATCTTGGGCATACCGACCGTGCTGAACGAGAGCGTTCTGTTGGCAAATGCTTGCGTAT
TGTGGAGCTAACGCGCACACTACCAACATCGGGCTATGTGGTGCATTTTGAGGCTGGTAACGGTGTGGATATTAACGGCT
TTAATGATGCAGATCAGCAGCAGTTCACCGATTCGCTTCGCGATTCGCTTGCAATGTTATTGGCTGGTGCCAATGTTCCT
GCGGCTCATTTTTGTGTGGAAAACCTTAATTATCCCTACGAGCTTGTTTGGGCTATTGTGCAAGAATTTGGTTTATCGGT
AACGCTTGATGTTGGGCACCTTGAATATTATGGATTTCCAACTGCTGACTATCTCAAACGCTACCTGTCCAAAGCCAAGG
TGTTGCACGTTCATGGCACTGTTGACGGCAAAGATCACAATTCGTTATGCTACATGAAGCCAGCAACTCTTGCTATACTG
ATGCAAGCACTTGCCGCTTCCCCCAATCCTCAGCGTGTTTTTACTATGGAGATATTTTCAGAGGAGGATTTTTTATCATC
GTGCAAGGTGATGGAGGGGTATGTCTTCCTTCCCCCTACATAA

Upstream 100 bases:

>100_bases
ATTGCTTGTGATGCGGCATTGTCAGGTTGTGAGCAGATGTTGACGTTTGATAAAAAGGCTGCAAAGTCAGAGCTTTTTAT
CTTGCTTGAAATATGAGAGG

Downstream 100 bases:

>100_bases
TCTCCCGCAAGCCACTGCTCAGCAAACGAACATCCTCATCCAAAAAGTGCGATGAGTGCAAACGTGCGCGTTTAATGGCG
GCTGCCTCAAGCGACACATC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSTITRPMTTMILKQRFPFRFGTSSYIIPADIIPNVEYLKDKVDDIELVLFESDEFSNLPSAEDIQTLKQLAEEWALTYC
VHLPLDVYLGHTDRAERERSVGKCLRIVELTRTLPTSGYVVHFEAGNGVDINGFNDADQQQFTDSLRDSLAMLLAGANVP
AAHFCVENLNYPYELVWAIVQEFGLSVTLDVGHLEYYGFPTADYLKRYLSKAKVLHVHGTVDGKDHNSLCYMKPATLAIL
MQALAASPNPQRVFTMEIFSEEDFLSSCKVMEGYVFLPPT

Sequences:

>Translated_280_residues
MSTITRPMTTMILKQRFPFRFGTSSYIIPADIIPNVEYLKDKVDDIELVLFESDEFSNLPSAEDIQTLKQLAEEWALTYC
VHLPLDVYLGHTDRAERERSVGKCLRIVELTRTLPTSGYVVHFEAGNGVDINGFNDADQQQFTDSLRDSLAMLLAGANVP
AAHFCVENLNYPYELVWAIVQEFGLSVTLDVGHLEYYGFPTADYLKRYLSKAKVLHVHGTVDGKDHNSLCYMKPATLAIL
MQALAASPNPQRVFTMEIFSEEDFLSSCKVMEGYVFLPPT
>Mature_279_residues
STITRPMTTMILKQRFPFRFGTSSYIIPADIIPNVEYLKDKVDDIELVLFESDEFSNLPSAEDIQTLKQLAEEWALTYCV
HLPLDVYLGHTDRAERERSVGKCLRIVELTRTLPTSGYVVHFEAGNGVDINGFNDADQQQFTDSLRDSLAMLLAGANVPA
AHFCVENLNYPYELVWAIVQEFGLSVTLDVGHLEYYGFPTADYLKRYLSKAKVLHVHGTVDGKDHNSLCYMKPATLAILM
QALAASPNPQRVFTMEIFSEEDFLSSCKVMEGYVFLPPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31579; Mature: 31448

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITRPMTTMILKQRFPFRFGTSSYIIPADIIPNVEYLKDKVDDIELVLFESDEFSNLP
CCCCHHHHHHHHHHHCCCCEECCCCEEECHHHCCCHHHHHHCCCCEEEEEECCCCCCCCC
SAEDIQTLKQLAEEWALTYCVHLPLDVYLGHTDRAERERSVGKCLRIVELTRTLPTSGYV
CHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
VHFEAGNGVDINGFNDADQQQFTDSLRDSLAMLLAGANVPAAHFCVENLNYPYELVWAIV
EEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH
QEFGLSVTLDVGHLEYYGFPTADYLKRYLSKAKVLHVHGTVDGKDHNSLCYMKPATLAIL
HHHCCEEEEEECCEEEECCCCHHHHHHHHHHCEEEEEEECCCCCCCCCEEEECHHHHHHH
MQALAASPNPQRVFTMEIFSEEDFLSSCKVMEGYVFLPPT
HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure 
STITRPMTTMILKQRFPFRFGTSSYIIPADIIPNVEYLKDKVDDIELVLFESDEFSNLP
CCCHHHHHHHHHHHCCCCEECCCCEEECHHHCCCHHHHHHCCCCEEEEEECCCCCCCCC
SAEDIQTLKQLAEEWALTYCVHLPLDVYLGHTDRAERERSVGKCLRIVELTRTLPTSGYV
CHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
VHFEAGNGVDINGFNDADQQQFTDSLRDSLAMLLAGANVPAAHFCVENLNYPYELVWAIV
EEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH
QEFGLSVTLDVGHLEYYGFPTADYLKRYLSKAKVLHVHGTVDGKDHNSLCYMKPATLAIL
HHHCCEEEEEECCEEEECCCCHHHHHHHHHHCEEEEEEECCCCCCCCCEEEECHHHHHHH
MQALAASPNPQRVFTMEIFSEEDFLSSCKVMEGYVFLPPT
HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA