Click here to switch to the map view.

The map label for this gene is 78188992

Identifier: 78188992

GI number: 78188992

Start: 1380089

End: 1381606

Strand: Reverse

Name: 78188992

Synonym: Cag_1025

Alternate gene names: NA

Gene position: 1381606-1380089 (Counterclockwise)

Preceding gene: 78188993

Following gene: 78188991

Centisome position: 53.72

GC content: 32.21

Gene sequence:

>1518_bases
ATGAAACCGCTACCCGTAGGCATACAAACGTTTAGTGAAATCATTAAGCAAGATTACTTGTATATTGATAAAACAAGTTT
AGCTAATGAATTGATTAAAAAACACAAATACGTTTTTCTATCACGTCCACGACGCTTTGGCAAAAGCCTATTTCTTGATA
CGCTCAAAAATATTTTTGAAGGCAAACAAGAGCTTTTTAAAGACTTGCTTATTTACAACCAATGGAATTGGACTGTAACC
TATCCCGTTATTAAAATAAGTTTTAGTGGCGGAATACGAGATACAGAAAGTTTGCGTGAAAATCTTTTTTATATCTTAAA
AGATAATCAAGAACGGCTCAATATTACTTGTGAAGAAAAAAGCAATGCAAATTTATGTTTTGCTGAGTTAATTAAAAAAG
CATTTCAACACTATCAGCAGAAGGTTGTTATCCTCATTGACGAATATGACAAGCCAATTCTTGATAACATTGAAAATATT
CCATCAGCACTCATTATCCGTGATGGAATGCGAGACTTTTATACCAAAATAAAAGAGAGTGATGAATATTTACGATTTGT
TTTTCTTACAGGAGTAAGCAAATTTTCCAAAGTATCACTCTTCAGTGGCTTAAACAATCTTGAAGATATTAGCCTCAATC
CAGATTTTGGTAATGTTTGTGGCTACACACAAAATGATGTTGATACCACTTTTGCACCCTATTTTGATGGCGTTGATATG
GAAGAGGTGAAACGCTGGTATAATGGCTATAATTTTCTTGGCGACAAAGTCTATAATCCATTTGATATTCTTCTTTTTAT
TAAAAATAAATATGTATTTGATAGTTATTGGTTTGAAACAGGTACTCCAAAATTTCTTATTGATCTTATCAAAAAGAATA
ACTATTTCATTCCTAATTTTTTAGATATCAAAGTTGATAAGAGTTTAGTTAATAGTTTTGATATTGAAAATATTAACCTA
CAAACCATTTTATTTCAAACAGGCTATTTAACAATTAAGCAATTTTTGCCATCTGGCATGGGGATTGGTTACAAGTTAGG
ATTTCCTAACAAGGAGGTTCAGATCAGTTTCAACAATTATATTTTGCAGGTGCTGACCTCTGATTCAGATAAAGAGCCAA
TTCGCCATGAACTTTTTGATATTATGAACAATGGAAAAGTTGCCAATTTAGAACCCGTTATCAAACGACTTTTTGCAAGT
ATTGCTTATAATAATTTTACCAATAATTATATAGAGAGTTATGAAGGCTTTTATGCAAGTGTGCTCTATGCTTATTTTGC
AAGTCTTGGTTTTGATATGATTGCTGAAGATATCACCAATAAAGGTAGAGTTGATTTAACCCTTAAAACCCTCGATAAAA
CCTATATTTTTGAATTCAAAGTAATTGCAGAGGAGCCGCTTGAGCAAATCAAGAAGATGAAATATTACGAGAAATATGAT
GGCGAACGTTATCTCATTGGCATTGTTTTTGATCCAAAGGCGAGAAACGTTAGTCGGTTTGAGTGGGAGAGGGTTTAA

Upstream 100 bases:

>100_bases
TATATCATTCATTACATCAATAACTTCAAAATCACCAAAATCTTGTTAATCCACTAATCCTGAAAATCCTGATTCAGACA
ACATTCAATCATCTATTATT

Downstream 100 bases:

>100_bases
ATTCTGAAAATCCTGATTCAGACAACATTCATCATTCAATCATCTATTATTATGAAACCGCTACCCGTAGGCATACAAAC
ATTCAGTAAAATAATCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKPLPVGIQTFSEIIKQDYLYIDKTSLANELIKKHKYVFLSRPRRFGKSLFLDTLKNIFEGKQELFKDLLIYNQWNWTVT
YPVIKISFSGGIRDTESLRENLFYILKDNQERLNITCEEKSNANLCFAELIKKAFQHYQQKVVILIDEYDKPILDNIENI
PSALIIRDGMRDFYTKIKESDEYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNVCGYTQNDVDTTFAPYFDGVDM
EEVKRWYNGYNFLGDKVYNPFDILLFIKNKYVFDSYWFETGTPKFLIDLIKKNNYFIPNFLDIKVDKSLVNSFDIENINL
QTILFQTGYLTIKQFLPSGMGIGYKLGFPNKEVQISFNNYILQVLTSDSDKEPIRHELFDIMNNGKVANLEPVIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDMIAEDITNKGRVDLTLKTLDKTYIFEFKVIAEEPLEQIKKMKYYEKYD
GERYLIGIVFDPKARNVSRFEWERV

Sequences:

>Translated_505_residues
MKPLPVGIQTFSEIIKQDYLYIDKTSLANELIKKHKYVFLSRPRRFGKSLFLDTLKNIFEGKQELFKDLLIYNQWNWTVT
YPVIKISFSGGIRDTESLRENLFYILKDNQERLNITCEEKSNANLCFAELIKKAFQHYQQKVVILIDEYDKPILDNIENI
PSALIIRDGMRDFYTKIKESDEYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNVCGYTQNDVDTTFAPYFDGVDM
EEVKRWYNGYNFLGDKVYNPFDILLFIKNKYVFDSYWFETGTPKFLIDLIKKNNYFIPNFLDIKVDKSLVNSFDIENINL
QTILFQTGYLTIKQFLPSGMGIGYKLGFPNKEVQISFNNYILQVLTSDSDKEPIRHELFDIMNNGKVANLEPVIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDMIAEDITNKGRVDLTLKTLDKTYIFEFKVIAEEPLEQIKKMKYYEKYD
GERYLIGIVFDPKARNVSRFEWERV
>Mature_505_residues
MKPLPVGIQTFSEIIKQDYLYIDKTSLANELIKKHKYVFLSRPRRFGKSLFLDTLKNIFEGKQELFKDLLIYNQWNWTVT
YPVIKISFSGGIRDTESLRENLFYILKDNQERLNITCEEKSNANLCFAELIKKAFQHYQQKVVILIDEYDKPILDNIENI
PSALIIRDGMRDFYTKIKESDEYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNVCGYTQNDVDTTFAPYFDGVDM
EEVKRWYNGYNFLGDKVYNPFDILLFIKNKYVFDSYWFETGTPKFLIDLIKKNNYFIPNFLDIKVDKSLVNSFDIENINL
QTILFQTGYLTIKQFLPSGMGIGYKLGFPNKEVQISFNNYILQVLTSDSDKEPIRHELFDIMNNGKVANLEPVIKRLFAS
IAYNNFTNNYIESYEGFYASVLYAYFASLGFDMIAEDITNKGRVDLTLKTLDKTYIFEFKVIAEEPLEQIKKMKYYEKYD
GERYLIGIVFDPKARNVSRFEWERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 59302; Mature: 59302

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLPVGIQTFSEIIKQDYLYIDKTSLANELIKKHKYVFLSRPRRFGKSLFLDTLKNIFE
CCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH
GKQELFKDLLIYNQWNWTVTYPVIKISFSGGIRDTESLRENLFYILKDNQERLNITCEEK
HHHHHHHHHHHEECCCEEEEEEEEEEEECCCCCCHHHHHHCEEEEEECCCCEEEEEEECC
SNANLCFAELIKKAFQHYQQKVVILIDEYDKPILDNIENIPSALIIRDGMRDFYTKIKES
CCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEECCCHHHHHHHHHCC
DEYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNVCGYTQNDVDTTFAPYFDGVDM
CHHEEEHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EEVKRWYNGYNFLGDKVYNPFDILLFIKNKYVFDSYWFETGTPKFLIDLIKKNNYFIPNF
HHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCCEECCCE
LDIKVDKSLVNSFDIENINLQTILFQTGYLTIKQFLPSGMGIGYKLGFPNKEVQISFNNY
EEEEECHHHHCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCE
ILQVLTSDSDKEPIRHELFDIMNNGKVANLEPVIKRLFASIAYNNFTNNYIESYEGFYAS
EEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLYAYFASLGFDMIAEDITNKGRVDLTLKTLDKTYIFEFKVIAEEPLEQIKKMKYYEKYD
HHHHHHHHHCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHCC
GERYLIGIVFDPKARNVSRFEWERV
CCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPLPVGIQTFSEIIKQDYLYIDKTSLANELIKKHKYVFLSRPRRFGKSLFLDTLKNIFE
CCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH
GKQELFKDLLIYNQWNWTVTYPVIKISFSGGIRDTESLRENLFYILKDNQERLNITCEEK
HHHHHHHHHHHEECCCEEEEEEEEEEEECCCCCCHHHHHHCEEEEEECCCCEEEEEEECC
SNANLCFAELIKKAFQHYQQKVVILIDEYDKPILDNIENIPSALIIRDGMRDFYTKIKES
CCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEECCCHHHHHHHHHCC
DEYLRFVFLTGVSKFSKVSLFSGLNNLEDISLNPDFGNVCGYTQNDVDTTFAPYFDGVDM
CHHEEEHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EEVKRWYNGYNFLGDKVYNPFDILLFIKNKYVFDSYWFETGTPKFLIDLIKKNNYFIPNF
HHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCCEECCCE
LDIKVDKSLVNSFDIENINLQTILFQTGYLTIKQFLPSGMGIGYKLGFPNKEVQISFNNY
EEEEECHHHHCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCE
ILQVLTSDSDKEPIRHELFDIMNNGKVANLEPVIKRLFASIAYNNFTNNYIESYEGFYAS
EEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLYAYFASLGFDMIAEDITNKGRVDLTLKTLDKTYIFEFKVIAEEPLEQIKKMKYYEKYD
HHHHHHHHHCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHCC
GERYLIGIVFDPKARNVSRFEWERV
CCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]