Click here to switch to the map view.

The map label for this gene is 78188936

Identifier: 78188936

GI number: 78188936

Start: 1305530

End: 1305949

Strand: Reverse

Name: 78188936

Synonym: Cag_0968

Alternate gene names: NA

Gene position: 1305949-1305530 (Counterclockwise)

Preceding gene: 78188937

Following gene: 78188934

Centisome position: 50.77

GC content: 47.14

Gene sequence:

>420_bases
ATGGGCGCTGCATGGAGCGGCGCCTTTTCTTTTAATCATTATAAGAGAACTTTTGTTATGCAACTTACGGGAAAACTGAT
TGCTATTTTACCTGAGCAAACAGGTGCGGGAAAAAATGGTCCTTGGAAAAAGCAAGATATTGTTCTTGAAACCAGCGGGC
AGTACCCTAAAAAAGTGTGTGTATCGTTTTGGGGCGATAAACTTGATCGGCAAATGTTGCAGCTTGGCACCATGCTTTCC
ATTTCGTTTGATGTTGAAAGCCGCGAGTATAACGGTAAATGGTACACCGATGTTAAGGGGTGGAAAGCTGAAGTAGCAGG
CAGAGCAGAGAGTGCGCCGTATGGCGGTGGCGATGATGCGGGTTCATGGGAGCCACCAGCGTTTGAGCCTACGTCAAGCA
ACGAGGAGTGTCCGTTTTAA

Upstream 100 bases:

>100_bases
GGCGTTGCAGGTGTACTGTTTGGGGTTGCCGTAGCATATGTTATGTTAAATATGCACAGCAGCCGCTAACCATGAGGTTA
GGCTCTTACCTTTTATTTTT

Downstream 100 bases:

>100_bases
GAACATGCAGTAAAACGCCTATTATATCGTCATTTCGGGCGATGGTGGCTGAGAGGCTTGGGCATTGAGCCTGTCGAAAT
GCTCGATGCTACCGATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MGAAWSGAFSFNHYKRTFVMQLTGKLIAILPEQTGAGKNGPWKKQDIVLETSGQYPKKVCVSFWGDKLDRQMLQLGTMLS
ISFDVESREYNGKWYTDVKGWKAEVAGRAESAPYGGGDDAGSWEPPAFEPTSSNEECPF

Sequences:

>Translated_139_residues
MGAAWSGAFSFNHYKRTFVMQLTGKLIAILPEQTGAGKNGPWKKQDIVLETSGQYPKKVCVSFWGDKLDRQMLQLGTMLS
ISFDVESREYNGKWYTDVKGWKAEVAGRAESAPYGGGDDAGSWEPPAFEPTSSNEECPF
>Mature_138_residues
GAAWSGAFSFNHYKRTFVMQLTGKLIAILPEQTGAGKNGPWKKQDIVLETSGQYPKKVCVSFWGDKLDRQMLQLGTMLSI
SFDVESREYNGKWYTDVKGWKAEVAGRAESAPYGGGDDAGSWEPPAFEPTSSNEECPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15395; Mature: 15264

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAWSGAFSFNHYKRTFVMQLTGKLIAILPEQTGAGKNGPWKKQDIVLETSGQYPKKVC
CCCCCCCCEECCCHHHHHEEEECCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHH
VSFWGDKLDRQMLQLGTMLSISFDVESREYNGKWYTDVKGWKAEVAGRAESAPYGGGDDA
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCC
GSWEPPAFEPTSSNEECPF
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GAAWSGAFSFNHYKRTFVMQLTGKLIAILPEQTGAGKNGPWKKQDIVLETSGQYPKKVC
CCCCCCCEECCCHHHHHEEEECCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHH
VSFWGDKLDRQMLQLGTMLSISFDVESREYNGKWYTDVKGWKAEVAGRAESAPYGGGDDA
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCC
GSWEPPAFEPTSSNEECPF
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA