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The map label for this gene is yajR [C]

Identifier: 78188859

GI number: 78188859

Start: 1219728

End: 1221041

Strand: Reverse

Name: yajR [C]

Synonym: Cag_0889

Alternate gene names: 78188859

Gene position: 1221041-1219728 (Counterclockwise)

Preceding gene: 78188861

Following gene: 78188858

Centisome position: 47.47

GC content: 46.96

Gene sequence:

>1314_bases
ATGAGTAGCAACAATTCCTACAAACTTGGACCTATTACTTTAGCCCCATCGGTGCTACCTCGCCATGCGTTAACCTACCT
TTATGCCGCATTTTTTTCCATTGGCTTAGTAACCTTTGTTTCCATTGGGCAAACCTACATTCTTAACGAGCACCTTAAAA
TTCCTACCTCACAGCAGGGTGCTATTAGTGGCGATTTAGTTTTTTGGACGGAAGTTGTAACCCTGCTCTTTTTTGTGCCA
GCAGGCATGTTGATGGATCGCATTGGGCGTAAACCTGTTTATAGCGCGGGATTTTTATTAGTTGCTTTGTCGTATGCGCT
CTATCCACTGTCGCGCTCCATTGAGGAGATGACCATTTACCGTATGATTTACGCGCTTGGCATTGTAGCTTTAACCAGCG
CGCTTTCAACGGTAATGATTGATTATGCGGCAGAGCGTTCGCGTGGTAAGCTCATTGCAATTACGGGTTTTCTTAACGGT
ATTGGTATTGTTGTTATTAACAGCTTTTTTGGTGGATTACCGCAAAAGCTTATGGCGCAAGGTTTTAGTGGGATTGAAGC
GGGGCTTTACACCCATTTTGGTATTGCGGCTATTGCCGTAGTTGCGGCAGTTGTGGTGGGATTGGGATTAAAAGGTGGCA
CCGAAGTTCGTAAAGAGGATCGCCCTCCACTTCGCTCCCTTTTTACCAGTGGTATTAAGTGTGCAAAAAATCCTCGTATT
TTGCTCTCCTATGCCGCCGCCTTTGTAGCGCGTGGCGACCAATCCATTATTGGAACTTTTGTGCCGCTATGGGGTACCAC
CACCGGTATTGCCCTTGGCATGGAACCCGCTGAGGCCGTTAAGCAAGGAATGATGATGTTTATTATTTCGCAAGCCGCTG
CACTGCTTTGGGCTCCCGTTATTGGACCGCTTATTGATCGCTGGAACCGCGTTACGGCACTCTTTGTTTGCATGGCACTT
GCCAGCGTTGGCTACCTTTCACTTGGCTTTATTGGTAATCCTCATGATGCCAATGCCTACATTTTTTTCATTCTTCTTGG
CATTGGGCAAATTAGCTCCTTCCTTGGCGCTCAATCGTTGATTGGGCAAGAAGCGCCAAAAGCTGAGCGTGGTTCAGTGG
TTGGCATGTTCAACATCAGCGGCGCTATTGGCATTCTTATTATAACCACACTTGGAGGGCGCTTGTTTGATAGTTGGAGC
CCCAAAGCCCCTTTTCTTGTAGTAGGTGCTATTAATGTGCTTGTAATGCTTGCCGCCATTTACGTGCGTATAAAAGCACC
CGGGAAAAATCTGCATGTTGCCGAAGAGGGGTAA

Upstream 100 bases:

>100_bases
TTCTCTTTGGGCTTGGCTCTTGCAATGAGTTGTGTATTTTTATGTTCTCATTGTCAACAATAACGCTTTTTGTATTTCCC
GCAAACATTATCAATAGCTT

Downstream 100 bases:

>100_bases
GGTGCCAATTATGCTCTTCTTCCATTTTTCAGTCATCCTGTAACCATCCGAACTGTTTTGGGTTGCTATGCCATCTATTC
CATTTTCACCCTTTATAACC

Product: transporter

Products: NA

Alternate protein names: Facilitator Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Ferric Reductase Domain-Containing Protein

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSSNNSYKLGPITLAPSVLPRHALTYLYAAFFSIGLVTFVSIGQTYILNEHLKIPTSQQGAISGDLVFWTEVVTLLFFVP
AGMLMDRIGRKPVYSAGFLLVALSYALYPLSRSIEEMTIYRMIYALGIVALTSALSTVMIDYAAERSRGKLIAITGFLNG
IGIVVINSFFGGLPQKLMAQGFSGIEAGLYTHFGIAAIAVVAAVVVGLGLKGGTEVRKEDRPPLRSLFTSGIKCAKNPRI
LLSYAAAFVARGDQSIIGTFVPLWGTTTGIALGMEPAEAVKQGMMMFIISQAAALLWAPVIGPLIDRWNRVTALFVCMAL
ASVGYLSLGFIGNPHDANAYIFFILLGIGQISSFLGAQSLIGQEAPKAERGSVVGMFNISGAIGILIITTLGGRLFDSWS
PKAPFLVVGAINVLVMLAAIYVRIKAPGKNLHVAEEG

Sequences:

>Translated_437_residues
MSSNNSYKLGPITLAPSVLPRHALTYLYAAFFSIGLVTFVSIGQTYILNEHLKIPTSQQGAISGDLVFWTEVVTLLFFVP
AGMLMDRIGRKPVYSAGFLLVALSYALYPLSRSIEEMTIYRMIYALGIVALTSALSTVMIDYAAERSRGKLIAITGFLNG
IGIVVINSFFGGLPQKLMAQGFSGIEAGLYTHFGIAAIAVVAAVVVGLGLKGGTEVRKEDRPPLRSLFTSGIKCAKNPRI
LLSYAAAFVARGDQSIIGTFVPLWGTTTGIALGMEPAEAVKQGMMMFIISQAAALLWAPVIGPLIDRWNRVTALFVCMAL
ASVGYLSLGFIGNPHDANAYIFFILLGIGQISSFLGAQSLIGQEAPKAERGSVVGMFNISGAIGILIITTLGGRLFDSWS
PKAPFLVVGAINVLVMLAAIYVRIKAPGKNLHVAEEG
>Mature_436_residues
SSNNSYKLGPITLAPSVLPRHALTYLYAAFFSIGLVTFVSIGQTYILNEHLKIPTSQQGAISGDLVFWTEVVTLLFFVPA
GMLMDRIGRKPVYSAGFLLVALSYALYPLSRSIEEMTIYRMIYALGIVALTSALSTVMIDYAAERSRGKLIAITGFLNGI
GIVVINSFFGGLPQKLMAQGFSGIEAGLYTHFGIAAIAVVAAVVVGLGLKGGTEVRKEDRPPLRSLFTSGIKCAKNPRIL
LSYAAAFVARGDQSIIGTFVPLWGTTTGIALGMEPAEAVKQGMMMFIISQAAALLWAPVIGPLIDRWNRVTALFVCMALA
SVGYLSLGFIGNPHDANAYIFFILLGIGQISSFLGAQSLIGQEAPKAERGSVVGMFNISGAIGILIITTLGGRLFDSWSP
KAPFLVVGAINVLVMLAAIYVRIKAPGKNLHVAEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46552; Mature: 46421

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNNSYKLGPITLAPSVLPRHALTYLYAAFFSIGLVTFVSIGQTYILNEHLKIPTSQQG
CCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
AISGDLVFWTEVVTLLFFVPAGMLMDRIGRKPVYSAGFLLVALSYALYPLSRSIEEMTIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMIYALGIVALTSALSTVMIDYAAERSRGKLIAITGFLNGIGIVVINSFFGGLPQKLMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHCCCCHHHHHC
GFSGIEAGLYTHFGIAAIAVVAAVVVGLGLKGGTEVRKEDRPPLRSLFTSGIKCAKNPRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH
LLSYAAAFVARGDQSIIGTFVPLWGTTTGIALGMEPAEAVKQGMMMFIISQAAALLWAPV
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGPLIDRWNRVTALFVCMALASVGYLSLGFIGNPHDANAYIFFILLGIGQISSFLGAQSL
HHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
IGQEAPKAERGSVVGMFNISGAIGILIITTLGGRLFDSWSPKAPFLVVGAINVLVMLAAI
HCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCEEEHHHHHHHHHHHHH
YVRIKAPGKNLHVAEEG
HHEEECCCCCCCCCCCC
>Mature Secondary Structure 
SSNNSYKLGPITLAPSVLPRHALTYLYAAFFSIGLVTFVSIGQTYILNEHLKIPTSQQG
CCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
AISGDLVFWTEVVTLLFFVPAGMLMDRIGRKPVYSAGFLLVALSYALYPLSRSIEEMTIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMIYALGIVALTSALSTVMIDYAAERSRGKLIAITGFLNGIGIVVINSFFGGLPQKLMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHCCCCHHHHHC
GFSGIEAGLYTHFGIAAIAVVAAVVVGLGLKGGTEVRKEDRPPLRSLFTSGIKCAKNPRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH
LLSYAAAFVARGDQSIIGTFVPLWGTTTGIALGMEPAEAVKQGMMMFIISQAAALLWAPV
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGPLIDRWNRVTALFVCMALASVGYLSLGFIGNPHDANAYIFFILLGIGQISSFLGAQSL
HHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
IGQEAPKAERGSVVGMFNISGAIGILIITTLGGRLFDSWSPKAPFLVVGAINVLVMLAAI
HCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCEEEHHHHHHHHHHHHH
YVRIKAPGKNLHVAEEG
HHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA