Click here to switch to the map view.

The map label for this gene is 78188850

Identifier: 78188850

GI number: 78188850

Start: 1213263

End: 1213715

Strand: Reverse

Name: 78188850

Synonym: Cag_0880

Alternate gene names: NA

Gene position: 1213715-1213263 (Counterclockwise)

Preceding gene: 78188851

Following gene: 78188849

Centisome position: 47.19

GC content: 28.7

Gene sequence:

>453_bases
ATGCTTCATTGTATGAAAATATATTTAGATGTTTGTTGTCTTAATCGTCCATTTGATGATCAAACACAAGATAAAATCCA
TCTTGAATCAGAAGCTGTTTTAACTATTATTCGTCATTTAGAAAAAAAAGATTGGGAATGGATTAGTAGTAGTGTTGTTT
TATATGAAGTCCAAAAAATTCCAAATCGAGACAGAAAACAACGTATTTTAAGATTATGTGATAAATCATCTGAGGTAATA
CTCTTGAATAAAGAGATTTACCGTTTTGCAGAAATTCTTAATAAAAAAGGGATTGCCTCATATGATGCACTTCATTTAGC
TTGTGCTCATTTTGCAAATGTAGATTTTTTTCTTTCAACAGATGAGAGGCTGATAAAAAAGGCTCAAAAAAATATAGATA
TATTCAACATGGTAATTGATAATCCTTTGTATTGGTTACAAACAATATGGTAA

Upstream 100 bases:

>100_bases
TTTTAAAATAATGAGAATTGTTGTTGGAGGACACTCGTAGCAACAACTATATGTTTAGAGGGCAAGCTATAATAAAAAGT
TTGCCCTTCATTTTTATTGA

Downstream 100 bases:

>100_bases
TATGAATTATGGCAACACAATCCATGACACTTGAACAAGTAAGACTACTTGGTATTTCAGCTCTATCACAACAGCTTGGA
ATGGTTGGTATGATACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLHCMKIYLDVCCLNRPFDDQTQDKIHLESEAVLTIIRHLEKKDWEWISSSVVLYEVQKIPNRDRKQRILRLCDKSSEVI
LLNKEIYRFAEILNKKGIASYDALHLACAHFANVDFFLSTDERLIKKAQKNIDIFNMVIDNPLYWLQTIW

Sequences:

>Translated_150_residues
MLHCMKIYLDVCCLNRPFDDQTQDKIHLESEAVLTIIRHLEKKDWEWISSSVVLYEVQKIPNRDRKQRILRLCDKSSEVI
LLNKEIYRFAEILNKKGIASYDALHLACAHFANVDFFLSTDERLIKKAQKNIDIFNMVIDNPLYWLQTIW
>Mature_150_residues
MLHCMKIYLDVCCLNRPFDDQTQDKIHLESEAVLTIIRHLEKKDWEWISSSVVLYEVQKIPNRDRKQRILRLCDKSSEVI
LLNKEIYRFAEILNKKGIASYDALHLACAHFANVDFFLSTDERLIKKAQKNIDIFNMVIDNPLYWLQTIW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17856; Mature: 17856

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHCMKIYLDVCCLNRPFDDQTQDKIHLESEAVLTIIRHLEKKDWEWISSSVVLYEVQKI
CHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHCCHHEEEEHHC
PNRDRKQRILRLCDKSSEVILLNKEIYRFAEILNKKGIASYDALHLACAHFANVDFFLST
CCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECC
DERLIKKAQKNIDIFNMVIDNPLYWLQTIW
HHHHHHHHHHCCHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MLHCMKIYLDVCCLNRPFDDQTQDKIHLESEAVLTIIRHLEKKDWEWISSSVVLYEVQKI
CHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHCCHHEEEEHHC
PNRDRKQRILRLCDKSSEVILLNKEIYRFAEILNKKGIASYDALHLACAHFANVDFFLST
CCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECC
DERLIKKAQKNIDIFNMVIDNPLYWLQTIW
HHHHHHHHHHCCHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA