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The map label for this gene is tnpA [H]

Identifier: 78188636

GI number: 78188636

Start: 931743

End: 932978

Strand: Reverse

Name: tnpA [H]

Synonym: Cag_0658

Alternate gene names: 78188636

Gene position: 932978-931743 (Counterclockwise)

Preceding gene: 78188659

Following gene: 78188607

Centisome position: 36.27

GC content: 41.02

Gene sequence:

>1236_bases
ATGAAAGATACAGTTCTTTTTCAGCAAGCCTTGTGTTTACCAGCGCCATGGTTTGTGAAATCATCAGCATTCGACATAGA
GCAAAAACGCCTCACCATACAGCTTGATTTTCAGAAAGGGAGTACTTTTAGTTGCCCAACATGCGGTCAGCATAACTTGA
AAGCCTATGATACGGCAGAGAAACAGTGGCGTCATCTGAATTTTTTTCAGCATGAATGCTATTTAACAGCACGCGTACCA
AGGATTTCGTGCCCCACTTGTGGTGTTAAAGCAATCACTGATTTACCATGGGCACGTCGCGACAGCGGCTTTACGCTCTT
GTTTGAAGCAATGATTATCGCATTAGTACCATCAATGCCCTGTAAAACGATAGCCAACTACGTAGGAGAATATGATAGCC
GTATCTGGCGCATTATTCATCACTACCTTGATGAGGTACTCGAACAGCAAGATTTATCATCAGTTACCAAAGTTGGACTT
GATGAAACAGCCAGCAAACGAGGGCACAACTATGTAACAAGCTTTGTTGATTTAGAGAGTTCAAAAGTGTTGTTCGTTAC
AGAAGGTAAAGATGCTACAACCGTTGAAAAATTTCATAAGCATTTGCTTGCTCATAAAGGTAAAGCTGAAAATATTAAAG
AAATTTGTTGCGATATGTCGCCAGCATTTATCAAAGGAGTTACGACGAACTTTCCTGAAGCCCATATCACCTTTGATAAA
TTTCACATCGTACAAGTCTTAACAAAAGCCGTTGATGAGGTGCGTCGTGAAGAACAAAAAGAGCGTCCTGAATTAGCTAA
AAGTCGCTATCTCTGGCTTAAAAATCAGGTGCATCTTAACCAATCACAACAGGTAAAATTGGAAAAGTTACAGCTCAAAA
AACTCAATTTGAAAACAGCGCGTGCTTATCAAGTGAAGCTGAATTTTCAAGAGTTTTTCAAGCAAGCCCCTGCCTATGCA
CAAAGCTTTCTCAATCAATGGTATTACTCGGCAAGCCATAGCCGTCTTGAACCAATCAAAGAGGCTGCACGAACTATTAA
GCGGCATTGGTATGGTATTCTCCGCTGGTTTACTTCAAACATTACCAACGGTAAATTAGAGGGGCTTAATAGCATGATTC
AAGCCGCTAAAGCTCGGGCTCGAGGTTACCGAACAACTAACAATCTTATCGCTATGATCTATTTTATTGGTGGTAAATTC
GAGTTTGCTTTACCTGCCCTTACCCACTCGAAATAG

Upstream 100 bases:

>100_bases
CCATGAAGATATGCTTTGTGCCATTCAATAATTTTGGCTCTTCGCTATTTGGAGTGGGTAAGAGAATAAGAAAGTACTAA
AAATAAGCAGTCATCGGATC

Downstream 100 bases:

>100_bases
CGAGGAACCATAATTTTCTCTAAGCTATATGCTAAATCCCATTGCGGCTGCCAATGTAATCGCGATTTTGCCTTTGAAAT
ATCACGTTTAAGATAGGTTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKDTVLFQQALCLPAPWFVKSSAFDIEQKRLTIQLDFQKGSTFSCPTCGQHNLKAYDTAEKQWRHLNFFQHECYLTARVP
RISCPTCGVKAITDLPWARRDSGFTLLFEAMIIALVPSMPCKTIANYVGEYDSRIWRIIHHYLDEVLEQQDLSSVTKVGL
DETASKRGHNYVTSFVDLESSKVLFVTEGKDATTVEKFHKHLLAHKGKAENIKEICCDMSPAFIKGVTTNFPEAHITFDK
FHIVQVLTKAVDEVRREEQKERPELAKSRYLWLKNQVHLNQSQQVKLEKLQLKKLNLKTARAYQVKLNFQEFFKQAPAYA
QSFLNQWYYSASHSRLEPIKEAARTIKRHWYGILRWFTSNITNGKLEGLNSMIQAAKARARGYRTTNNLIAMIYFIGGKF
EFALPALTHSK

Sequences:

>Translated_411_residues
MKDTVLFQQALCLPAPWFVKSSAFDIEQKRLTIQLDFQKGSTFSCPTCGQHNLKAYDTAEKQWRHLNFFQHECYLTARVP
RISCPTCGVKAITDLPWARRDSGFTLLFEAMIIALVPSMPCKTIANYVGEYDSRIWRIIHHYLDEVLEQQDLSSVTKVGL
DETASKRGHNYVTSFVDLESSKVLFVTEGKDATTVEKFHKHLLAHKGKAENIKEICCDMSPAFIKGVTTNFPEAHITFDK
FHIVQVLTKAVDEVRREEQKERPELAKSRYLWLKNQVHLNQSQQVKLEKLQLKKLNLKTARAYQVKLNFQEFFKQAPAYA
QSFLNQWYYSASHSRLEPIKEAARTIKRHWYGILRWFTSNITNGKLEGLNSMIQAAKARARGYRTTNNLIAMIYFIGGKF
EFALPALTHSK
>Mature_411_residues
MKDTVLFQQALCLPAPWFVKSSAFDIEQKRLTIQLDFQKGSTFSCPTCGQHNLKAYDTAEKQWRHLNFFQHECYLTARVP
RISCPTCGVKAITDLPWARRDSGFTLLFEAMIIALVPSMPCKTIANYVGEYDSRIWRIIHHYLDEVLEQQDLSSVTKVGL
DETASKRGHNYVTSFVDLESSKVLFVTEGKDATTVEKFHKHLLAHKGKAENIKEICCDMSPAFIKGVTTNFPEAHITFDK
FHIVQVLTKAVDEVRREEQKERPELAKSRYLWLKNQVHLNQSQQVKLEKLQLKKLNLKTARAYQVKLNFQEFFKQAPAYA
QSFLNQWYYSASHSRLEPIKEAARTIKRHWYGILRWFTSNITNGKLEGLNSMIQAAKARARGYRTTNNLIAMIYFIGGKF
EFALPALTHSK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47424; Mature: 47424

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTVLFQQALCLPAPWFVKSSAFDIEQKRLTIQLDFQKGSTFSCPTCGQHNLKAYDTAE
CCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHCCHH
KQWRHLNFFQHECYLTARVPRISCPTCGVKAITDLPWARRDSGFTLLFEAMIIALVPSMP
HHHHHCCHHHHEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
CKTIANYVGEYDSRIWRIIHHYLDEVLEQQDLSSVTKVGLDETASKRGHNYVTSFVDLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHEECCC
SKVLFVTEGKDATTVEKFHKHLLAHKGKAENIKEICCDMSPAFIKGVTTNFPEAHITFDK
CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCEEEHHH
FHIVQVLTKAVDEVRREEQKERPELAKSRYLWLKNQVHLNQSQQVKLEKLQLKKLNLKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEECCCCHHHHHHHHHHHHCCCCEE
RAYQVKLNFQEFFKQAPAYAQSFLNQWYYSASHSRLEPIKEAARTIKRHWYGILRWFTSN
EEEEEEECHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ITNGKLEGLNSMIQAAKARARGYRTTNNLIAMIYFIGGKFEFALPALTHSK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure
MKDTVLFQQALCLPAPWFVKSSAFDIEQKRLTIQLDFQKGSTFSCPTCGQHNLKAYDTAE
CCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHCCHH
KQWRHLNFFQHECYLTARVPRISCPTCGVKAITDLPWARRDSGFTLLFEAMIIALVPSMP
HHHHHCCHHHHEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
CKTIANYVGEYDSRIWRIIHHYLDEVLEQQDLSSVTKVGLDETASKRGHNYVTSFVDLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHEECCC
SKVLFVTEGKDATTVEKFHKHLLAHKGKAENIKEICCDMSPAFIKGVTTNFPEAHITFDK
CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCEEEHHH
FHIVQVLTKAVDEVRREEQKERPELAKSRYLWLKNQVHLNQSQQVKLEKLQLKKLNLKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEECCCCHHHHHHHHHHHHCCCCEE
RAYQVKLNFQEFFKQAPAYAQSFLNQWYYSASHSRLEPIKEAARTIKRHWYGILRWFTSN
EEEEEEECHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ITNGKLEGLNSMIQAAKARARGYRTTNNLIAMIYFIGGKFEFALPALTHSK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]