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The map label for this gene is ykhA [H]

Identifier: 78188599

GI number: 78188599

Start: 896297

End: 896704

Strand: Reverse

Name: ykhA [H]

Synonym: Cag_0621

Alternate gene names: 78188599

Gene position: 896704-896297 (Counterclockwise)

Preceding gene: 78188606

Following gene: 78188598

Centisome position: 34.86

GC content: 45.59

Gene sequence:

>408_bases
ATGCAAACCACTATGGAAACTTACAAACTCGTTTTACCCGAACACCTGAACCACTACGGCTTTCTCTTTGGCGGCAACTT
GCTGAAATGGATTGATGAGGTAAGCTACATTGCCGTGTCGCTCGACTATCCGGGCTGCAACTTTGTTACCGTTGGCATGG
ATAAGGTGGAATTTCGCAAAAGCATTCGTAGCGGTACCATTCTCTGCTTTGTAACCGAAAAGAGCAAAATTGGCGCCACC
TCCGTAGAGTACACGGTGCATGTTTATAAAAAAAGCATTGAAAGTGGTGAACGAGTGCTTGCCTTTAGCACCCACATCAC
CTTTGTCTGCCTTGATGAGGAGGGGAAGAAAAAAGAGCTTTGCTGCGGTAGCTACCAATCCATTGATAGCAACAAAAATT
GCAAGTAG

Upstream 100 bases:

>100_bases
CAACCATTTTATCATACGTTTAGTGATACTTCCCTAAAGTCATGTTTCTTGTCATTCCCTCTCAAGCTGGAATCCAAAAT
CGTGCAGATCACAACGTTTA

Downstream 100 bases:

>100_bases
CTTGAACACGTAACGGGGTTTATTAACGATTGAAAATCGCTCATTTCAAACATATGTTTATAAACCCCGTTAATATAATG
TGTGTTAATTTTTTATATTC

Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQTTMETYKLVLPEHLNHYGFLFGGNLLKWIDEVSYIAVSLDYPGCNFVTVGMDKVEFRKSIRSGTILCFVTEKSKIGAT
SVEYTVHVYKKSIESGERVLAFSTHITFVCLDEEGKKKELCCGSYQSIDSNKNCK

Sequences:

>Translated_135_residues
MQTTMETYKLVLPEHLNHYGFLFGGNLLKWIDEVSYIAVSLDYPGCNFVTVGMDKVEFRKSIRSGTILCFVTEKSKIGAT
SVEYTVHVYKKSIESGERVLAFSTHITFVCLDEEGKKKELCCGSYQSIDSNKNCK
>Mature_135_residues
MQTTMETYKLVLPEHLNHYGFLFGGNLLKWIDEVSYIAVSLDYPGCNFVTVGMDKVEFRKSIRSGTILCFVTEKSKIGAT
SVEYTVHVYKKSIESGERVLAFSTHITFVCLDEEGKKKELCCGSYQSIDSNKNCK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15269; Mature: 15269

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTMETYKLVLPEHLNHYGFLFGGNLLKWIDEVSYIAVSLDYPGCNFVTVGMDKVEFRK
CCCCHHHHEECCCHHCCCCEEEECCHHHHHHHCCEEEEEEECCCCCCEEEECCCHHHHHH
SIRSGTILCFVTEKSKIGATSVEYTVHVYKKSIESGERVLAFSTHITFVCLDEEGKKKEL
HHCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCCCCC
CCGSYQSIDSNKNCK
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTTMETYKLVLPEHLNHYGFLFGGNLLKWIDEVSYIAVSLDYPGCNFVTVGMDKVEFRK
CCCCHHHHEECCCHHCCCCEEEECCHHHHHHHCCEEEEEEECCCCCCEEEECCCHHHHHH
SIRSGTILCFVTEKSKIGATSVEYTVHVYKKSIESGERVLAFSTHITFVCLDEEGKKKEL
HHCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCCCCC
CCGSYQSIDSNKNCK
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]