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The map label for this gene is rutD [H]

Identifier: 78188569

GI number: 78188569

Start: 695270

End: 696145

Strand: Reverse

Name: rutD [H]

Synonym: Cag_0591

Alternate gene names: 78188569

Gene position: 696145-695270 (Counterclockwise)

Preceding gene: 78188573

Following gene: 78188568

Centisome position: 27.07

GC content: 44.75

Gene sequence:

>876_bases
ATGAGCTACTTTGCCTCTACCCGTTGTCGGCTGTATTATGAAGATAGTGCTGAAGGCGATCCATCGGCATTAAGCAAACC
CACCATATTTTTTGTTAATGGATGGGCAATCTCCTCTCGTTATTGGAAGCCACTTGTGTCCATTCTCTCGGATCGGTATC
GCTGCATTATTTACGATCAAAGTGGTACAGGGCAAACCTTAATTAAGGGATATAATCCCACCTTTACCATTCAAGGCTTT
ACGGATGAGGCATCTGAATTGTTGGAGCATTTGGAATTGCACCACTCCCGCAATGTGCATATTGTAGGGCACTCAATGGG
CGGCATGGTGGCAACGGATCTTTGTATGCGCTACCCCGATGCGCTTGTTTCATCAACCATTATTGCGTGTGGCATTTTTG
AGGAAACTCCTTTTACCTCCGTTGGTTTAATGATGTTGGGGGGATTAATTGATGTTTCCATGAATTTGCGCTCCATTTTT
TTAATGGAACCATTCCGCAGCATGTTTATTAATCGGGCGGTAGCAAAAGCGATTAGCAAAGAGTATCAAGATGTTATTAT
TGATGACTTTACGAAATCCGATCACGCTGCAACGAATGCCGTTGGTAAATTCTCGATTGATCGCAATGTATTGCGCACTT
ACACGCGCCATGTGCTTGCAATTCAAGCGCCTTTGCTCTGTAGTGTTGGAATGGCGGATCAAACCATTCCGCCTGAAGGC
ACCTTAACGCTGTACGAAAAGCGAAAAGCGAAAAGTGAGCTGCAAACCTCGCTTGCTCGCTTTGAGGATCTTGGGCATTT
GCCTATGCTTGAAGCTACTGAGCTGTTTGCTCAAGTGCTTGATAAACATTTTCAACAGGCTCAACAGTTGCTCTAA

Upstream 100 bases:

>100_bases
CCCTGCTTCGCTACAAGCATGTGCACAAATTAATAAGCACTACTGTATATTGTCGGTTTTACTTTTCATGTAGAAAAGCT
AATAACCACTCTCCCCTACC

Downstream 100 bases:

>100_bases
ACTGTTAAGTTGACCGTAACATTTTCACAACAAGACATTCACCTATCGTGAAATCACTGCTTTATAAATCGCTCTTTCTT
TTGCTTGCCTATGTTTTGAG

Product: proline iminopeptidase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSYFASTRCRLYYEDSAEGDPSALSKPTIFFVNGWAISSRYWKPLVSILSDRYRCIIYDQSGTGQTLIKGYNPTFTIQGF
TDEASELLEHLELHHSRNVHIVGHSMGGMVATDLCMRYPDALVSSTIIACGIFEETPFTSVGLMMLGGLIDVSMNLRSIF
LMEPFRSMFINRAVAKAISKEYQDVIIDDFTKSDHAATNAVGKFSIDRNVLRTYTRHVLAIQAPLLCSVGMADQTIPPEG
TLTLYEKRKAKSELQTSLARFEDLGHLPMLEATELFAQVLDKHFQQAQQLL

Sequences:

>Translated_291_residues
MSYFASTRCRLYYEDSAEGDPSALSKPTIFFVNGWAISSRYWKPLVSILSDRYRCIIYDQSGTGQTLIKGYNPTFTIQGF
TDEASELLEHLELHHSRNVHIVGHSMGGMVATDLCMRYPDALVSSTIIACGIFEETPFTSVGLMMLGGLIDVSMNLRSIF
LMEPFRSMFINRAVAKAISKEYQDVIIDDFTKSDHAATNAVGKFSIDRNVLRTYTRHVLAIQAPLLCSVGMADQTIPPEG
TLTLYEKRKAKSELQTSLARFEDLGHLPMLEATELFAQVLDKHFQQAQQLL
>Mature_290_residues
SYFASTRCRLYYEDSAEGDPSALSKPTIFFVNGWAISSRYWKPLVSILSDRYRCIIYDQSGTGQTLIKGYNPTFTIQGFT
DEASELLEHLELHHSRNVHIVGHSMGGMVATDLCMRYPDALVSSTIIACGIFEETPFTSVGLMMLGGLIDVSMNLRSIFL
MEPFRSMFINRAVAKAISKEYQDVIIDDFTKSDHAATNAVGKFSIDRNVLRTYTRHVLAIQAPLLCSVGMADQTIPPEGT
LTLYEKRKAKSELQTSLARFEDLGHLPMLEATELFAQVLDKHFQQAQQLL

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32642; Mature: 32511

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFASTRCRLYYEDSAEGDPSALSKPTIFFVNGWAISSRYWKPLVSILSDRYRCIIYDQ
CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECEEECHHHHHHHHHHHCCCCEEEEEEC
SGTGQTLIKGYNPTFTIQGFTDEASELLEHLELHHSRNVHIVGHSMGGMVATDLCMRYPD
CCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCHH
ALVSSTIIACGIFEETPFTSVGLMMLGGLIDVSMNLRSIFLMEPFRSMFINRAVAKAISK
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYQDVIIDDFTKSDHAATNAVGKFSIDRNVLRTYTRHVLAIQAPLLCSVGMADQTIPPEG
HHHHHHHHCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
TLTLYEKRKAKSELQTSLARFEDLGHLPMLEATELFAQVLDKHFQQAQQLL
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYFASTRCRLYYEDSAEGDPSALSKPTIFFVNGWAISSRYWKPLVSILSDRYRCIIYDQ
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECEEECHHHHHHHHHHHCCCCEEEEEEC
SGTGQTLIKGYNPTFTIQGFTDEASELLEHLELHHSRNVHIVGHSMGGMVATDLCMRYPD
CCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCHH
ALVSSTIIACGIFEETPFTSVGLMMLGGLIDVSMNLRSIFLMEPFRSMFINRAVAKAISK
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYQDVIIDDFTKSDHAATNAVGKFSIDRNVLRTYTRHVLAIQAPLLCSVGMADQTIPPEG
HHHHHHHHCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
TLTLYEKRKAKSELQTSLARFEDLGHLPMLEATELFAQVLDKHFQQAQQLL
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA