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The map label for this gene is 78188522

Identifier: 78188522

GI number: 78188522

Start: 649042

End: 649608

Strand: Reverse

Name: 78188522

Synonym: Cag_0544

Alternate gene names: NA

Gene position: 649608-649042 (Counterclockwise)

Preceding gene: 78188524

Following gene: 162319774

Centisome position: 25.26

GC content: 40.74

Gene sequence:

>567_bases
ATGAAAAAAGCTCTCTTAACCGCTCTATTGGTTGGAATGTCTGCAGCTCCTGCACAGCAACTGTTTGCAAAAGGCTTCAA
TTACAACTACGTTCAAGGTCAATACGTAAAACCGAGCATGGATAATGTTGATGGTGGTAGTGGCTTTGCAATCACCGGCT
CTGTGGCTTTAAATGATAATTTTGCATTAAACGCCAGTTACAATGATGCTTCATTTGATAATGATATTGATGCAAGCGGA
TATAATGTTGGTGTTACCTACCATATGCCGGTAGCTGATTCTACCGATATTTTATTGAATGCTGCTTTCGAGCAAGCAGA
AGCATCCGCCTTTGGAATAAGTACAGATGACACAGGATATAGCATTGGTGCCGGTATCCGTCAAAAAGTAGCTTCAGCCG
TTGAGTTAGAGGCAGGTATTTACAATGTTAGTATTTTTGATGATTCTAACATTGGTTTTGGTGCAGCAGCGCTTGTTGAT
GTAGCTAAAAACATAGCATTAGGAGTTAGCTACGAAAATTTGGATGAGAGTAATACGATTGGCGTTGGTGTCCGCGCTGG
ATTTTAA

Upstream 100 bases:

>100_bases
AAAAAAATTTTTTTAACAACTTGCTCTGTAAATGCGGTAGTTGTGTGCCGCTATTTTTTGAATCAACTCACTTTTTAATA
ATTAAACGGAGAAAAAAATA

Downstream 100 bases:

>100_bases
GTAAGAGCGGTTTTAAAAACCAATGATACTCTTTAGCCACCTTCAGAACAAAAACTGAAGGTGGCTTTTTTATTTTATAA
CACCTTTCAAAACGACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein Porin Family

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKKALLTALLVGMSAAPAQQLFAKGFNYNYVQGQYVKPSMDNVDGGSGFAITGSVALNDNFALNASYNDASFDNDIDASG
YNVGVTYHMPVADSTDILLNAAFEQAEASAFGISTDDTGYSIGAGIRQKVASAVELEAGIYNVSIFDDSNIGFGAAALVD
VAKNIALGVSYENLDESNTIGVGVRAGF

Sequences:

>Translated_188_residues
MKKALLTALLVGMSAAPAQQLFAKGFNYNYVQGQYVKPSMDNVDGGSGFAITGSVALNDNFALNASYNDASFDNDIDASG
YNVGVTYHMPVADSTDILLNAAFEQAEASAFGISTDDTGYSIGAGIRQKVASAVELEAGIYNVSIFDDSNIGFGAAALVD
VAKNIALGVSYENLDESNTIGVGVRAGF
>Mature_188_residues
MKKALLTALLVGMSAAPAQQLFAKGFNYNYVQGQYVKPSMDNVDGGSGFAITGSVALNDNFALNASYNDASFDNDIDASG
YNVGVTYHMPVADSTDILLNAAFEQAEASAFGISTDDTGYSIGAGIRQKVASAVELEAGIYNVSIFDDSNIGFGAAALVD
VAKNIALGVSYENLDESNTIGVGVRAGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19509; Mature: 19509

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALLTALLVGMSAAPAQQLFAKGFNYNYVQGQYVKPSMDNVDGGSGFAITGSVALNDN
CCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCC
FALNASYNDASFDNDIDASGYNVGVTYHMPVADSTDILLNAAFEQAEASAFGISTDDTGY
EEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHEEEHHHHHCCCCEECCCCCCCCE
SIGAGIRQKVASAVELEAGIYNVSIFDDSNIGFGAAALVDVAKNIALGVSYENLDESNTI
ECCHHHHHHHHHHHEECCCEEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCE
GVGVRAGF
EEEEEECC
>Mature Secondary Structure
MKKALLTALLVGMSAAPAQQLFAKGFNYNYVQGQYVKPSMDNVDGGSGFAITGSVALNDN
CCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCC
FALNASYNDASFDNDIDASGYNVGVTYHMPVADSTDILLNAAFEQAEASAFGISTDDTGY
EEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHEEEHHHHHCCCCEECCCCCCCCE
SIGAGIRQKVASAVELEAGIYNVSIFDDSNIGFGAAALVDVAKNIALGVSYENLDESNTI
ECCHHHHHHHHHHHEECCCEEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCE
GVGVRAGF
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA