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The map label for this gene is 78188097

Identifier: 78188097

GI number: 78188097

Start: 127503

End: 129332

Strand: Reverse

Name: 78188097

Synonym: Cag_0114

Alternate gene names: NA

Gene position: 129332-127503 (Counterclockwise)

Preceding gene: 78188098

Following gene: 78188092

Centisome position: 5.03

GC content: 43.28

Gene sequence:

>1830_bases
ATGGCATACTTCAAGCGCATTTGTCTCGTGGAAGCCCCACAGACCATCATTACCCCATTCCCTCGTTTTATTTCCGACAG
CATTGGCATTTGCTACCTTGCAGCGGCTATTAAAAATGACGTTGAGTATCTGGTAATACCAGAAAACTTTTATAACGATG
CCATTTTTGAAAGTATGCGCCGCTTGCTTAAAGAGCAACCATGCGATCTTGTAGCCATATCGTCAATGACTGGTGCTTTT
AATCAGGCGATTAAGTTGGCAAAGATTGCAAAAGAAGCTGGTGCCTTTGTGATTATGGGGGGCTTTCACCCAACGGCATT
GCCTGAAGAAGTGCTCAAGCACTCTTGTGTTGATGTTGTGGTGATTGGCGAGGGTGAAGAAACATTCAGGGAATTAGTAA
AAAACGGTCCATCTCGTAACGTTCGTGGTATTGCATATCGCGACAACGGAGGCATTGTTCGTACTGAGCCACGCCCCGTT
ATTACCAATATTGATACCATTCCATTTCCACTACGCTCTCTTCGCCCAAAACGATATGGCGAAACGGGTGATGCTTACTC
AATTGACACTATTTACACTTCGCGTGGCTGCCCTTGGAGCTGCTCATTCTGTGCTAACGATCAAATGCACAAAGCATGGA
GAGGGCGCTCACCAGAAAATGTTGTAGAGGAAATTGCACTACTGCACGATCCAAAGAACAAGAAACTCATTAAAATCTGG
GATGCAAACTTTCTTACAAACATTGGGCGAGCTGAAAAAATTTGCGACTTACTCTTGGAAAAAGGGCTTACAAACTTCAG
GATTGTTACAGAAACACGAGCAAAAGATATTGTTCGGGCAGAACGAATTCTTGGCAAATTGCGCCAAATAGGGCTCAGTA
AAGCTGGACTTGGCATTGAAAGCCCAAATAAGGAAACACTGGCATTAATGAACAAGCAAAACAGCCTTAATGATGTCAGC
AAAGCCATTGAATTATGCCGAAAACACGGAATTGGCACCGAAGGCTACTTTATTATTGGCCATTATAGCGAGGATATGAC
AGCAACACTCGCATACCCTGAATTTGCTCGCTCGCTTGGACTTCGTCAAGCGCTTTTTATGGTAATGACCCCATACCCCG
GTACCGCTATTTTTAATGAGTATAAAGCCGAAGAAAGAATTCGATCGTTTGATTGGGACTTGTACAACAACTACTGCCCC
GTTATTACAACTCGCCACATGAATAGCGACACACTTGTTGCAATGCTTGCATACTGCAATGTGGCGTTTAATGGCTACCG
TTCAGTAATGAAGCGCAATAATATGAATGCGTTGCTCTTAAACTTTATGGTTGACCTTTTCCAACTCACTTTTCTTTTAC
GTGTCAACAAAAACATTAGTGAACAAGCAATTATTGACCTACTCTTTAATGCTCTGCAACTCTTTTTAGAAGAAAAAAAG
GGAATCGTGCTGCAAACGGATATGAAATACAAAAAACAGCTTCAACATCCTCTCCATTTGCGACTTGAGCACCCATCAGG
CAAAAGCATTGATTTTACCCTTTCAGAGCACAATAGTCGGCGAGAATTAACCATGCAACATAATACAAGTAACATGGTGC
CATTACCTGTTGGCTCGCGATGCATTAAACTTGGTACACTGGTAGCCTGCGCCTGCTCAATTTCTATGGATAGCTTGATG
ACTGCACTGTACCAAAATGAATGGGCTCATAACAATCCTAAACGCATAACAGCGCCACTCCTTAGCCTGTTGACCGATCG
TTCGCTGCAACACTTTGGGCGCAATGTTGCATTACTCTATCTCCGCGTGCTCTTATCAGGCAAGAAATAA

Upstream 100 bases:

>100_bases
CTTTGTATTATAAAGGGAATCGCAAGCGTTTCTTTTTTCTCGCATCTTTAAGGTTGCGTTTGAGTAAAAAAATTCAAACA
ACCATAATAGGGGCCATCAA

Downstream 100 bases:

>100_bases
AGAGTGCTCTCCATATTTGGAAGAGAGTTACTCGCCCTCAACTTCTTTCGGCTCCTCTGGTGAACGCACCGTTCGCGTAG
CACGAATAATTTCTGCGGCT

Product: Elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MAYFKRICLVEAPQTIITPFPRFISDSIGICYLAAAIKNDVEYLVIPENFYNDAIFESMRRLLKEQPCDLVAISSMTGAF
NQAIKLAKIAKEAGAFVIMGGFHPTALPEEVLKHSCVDVVVIGEGEETFRELVKNGPSRNVRGIAYRDNGGIVRTEPRPV
ITNIDTIPFPLRSLRPKRYGETGDAYSIDTIYTSRGCPWSCSFCANDQMHKAWRGRSPENVVEEIALLHDPKNKKLIKIW
DANFLTNIGRAEKICDLLLEKGLTNFRIVTETRAKDIVRAERILGKLRQIGLSKAGLGIESPNKETLALMNKQNSLNDVS
KAIELCRKHGIGTEGYFIIGHYSEDMTATLAYPEFARSLGLRQALFMVMTPYPGTAIFNEYKAEERIRSFDWDLYNNYCP
VITTRHMNSDTLVAMLAYCNVAFNGYRSVMKRNNMNALLLNFMVDLFQLTFLLRVNKNISEQAIIDLLFNALQLFLEEKK
GIVLQTDMKYKKQLQHPLHLRLEHPSGKSIDFTLSEHNSRRELTMQHNTSNMVPLPVGSRCIKLGTLVACACSISMDSLM
TALYQNEWAHNNPKRITAPLLSLLTDRSLQHFGRNVALLYLRVLLSGKK

Sequences:

>Translated_609_residues
MAYFKRICLVEAPQTIITPFPRFISDSIGICYLAAAIKNDVEYLVIPENFYNDAIFESMRRLLKEQPCDLVAISSMTGAF
NQAIKLAKIAKEAGAFVIMGGFHPTALPEEVLKHSCVDVVVIGEGEETFRELVKNGPSRNVRGIAYRDNGGIVRTEPRPV
ITNIDTIPFPLRSLRPKRYGETGDAYSIDTIYTSRGCPWSCSFCANDQMHKAWRGRSPENVVEEIALLHDPKNKKLIKIW
DANFLTNIGRAEKICDLLLEKGLTNFRIVTETRAKDIVRAERILGKLRQIGLSKAGLGIESPNKETLALMNKQNSLNDVS
KAIELCRKHGIGTEGYFIIGHYSEDMTATLAYPEFARSLGLRQALFMVMTPYPGTAIFNEYKAEERIRSFDWDLYNNYCP
VITTRHMNSDTLVAMLAYCNVAFNGYRSVMKRNNMNALLLNFMVDLFQLTFLLRVNKNISEQAIIDLLFNALQLFLEEKK
GIVLQTDMKYKKQLQHPLHLRLEHPSGKSIDFTLSEHNSRRELTMQHNTSNMVPLPVGSRCIKLGTLVACACSISMDSLM
TALYQNEWAHNNPKRITAPLLSLLTDRSLQHFGRNVALLYLRVLLSGKK
>Mature_608_residues
AYFKRICLVEAPQTIITPFPRFISDSIGICYLAAAIKNDVEYLVIPENFYNDAIFESMRRLLKEQPCDLVAISSMTGAFN
QAIKLAKIAKEAGAFVIMGGFHPTALPEEVLKHSCVDVVVIGEGEETFRELVKNGPSRNVRGIAYRDNGGIVRTEPRPVI
TNIDTIPFPLRSLRPKRYGETGDAYSIDTIYTSRGCPWSCSFCANDQMHKAWRGRSPENVVEEIALLHDPKNKKLIKIWD
ANFLTNIGRAEKICDLLLEKGLTNFRIVTETRAKDIVRAERILGKLRQIGLSKAGLGIESPNKETLALMNKQNSLNDVSK
AIELCRKHGIGTEGYFIIGHYSEDMTATLAYPEFARSLGLRQALFMVMTPYPGTAIFNEYKAEERIRSFDWDLYNNYCPV
ITTRHMNSDTLVAMLAYCNVAFNGYRSVMKRNNMNALLLNFMVDLFQLTFLLRVNKNISEQAIIDLLFNALQLFLEEKKG
IVLQTDMKYKKQLQHPLHLRLEHPSGKSIDFTLSEHNSRRELTMQHNTSNMVPLPVGSRCIKLGTLVACACSISMDSLMT
ALYQNEWAHNNPKRITAPLLSLLTDRSLQHFGRNVALLYLRVLLSGKK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 68902; Mature: 68771

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYFKRICLVEAPQTIITPFPRFISDSIGICYLAAAIKNDVEYLVIPENFYNDAIFESMR
CCHHHHHHHHCCCHHHHCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCHHCCHHHHHHHH
RLLKEQPCDLVAISSMTGAFNQAIKLAKIAKEAGAFVIMGGFHPTALPEEVLKHSCVDVV
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEE
VIGEGEETFRELVKNGPSRNVRGIAYRDNGGIVRTEPRPVITNIDTIPFPLRSLRPKRYG
EECCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHCCCCCCC
ETGDAYSIDTIYTSRGCPWSCSFCANDQMHKAWRGRSPENVVEEIALLHDPKNKKLIKIW
CCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEE
DANFLTNIGRAEKICDLLLEKGLTNFRIVTETRAKDIVRAERILGKLRQIGLSKAGLGIE
CCHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPNKETLALMNKQNSLNDVSKAIELCRKHGIGTEGYFIIGHYSEDMTATLAYPEFARSLG
CCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHHHH
LRQALFMVMTPYPGTAIFNEYKAEERIRSFDWDLYNNYCPVITTRHMNSDTLVAMLAYCN
HHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCHHHHHHHHHHH
VAFNGYRSVMKRNNMNALLLNFMVDLFQLTFLLRVNKNISEQAIIDLLFNALQLFLEEKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GIVLQTDMKYKKQLQHPLHLRLEHPSGKSIDFTLSEHNSRRELTMQHNTSNMVPLPVGSR
CEEEEECHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCHH
CIKLGTLVACACSISMDSLMTALYQNEWAHNNPKRITAPLLSLLTDRSLQHFGRNVALLY
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
LRVLLSGKK
HHHHHCCCC
>Mature Secondary Structure 
AYFKRICLVEAPQTIITPFPRFISDSIGICYLAAAIKNDVEYLVIPENFYNDAIFESMR
CHHHHHHHHCCCHHHHCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCHHCCHHHHHHHH
RLLKEQPCDLVAISSMTGAFNQAIKLAKIAKEAGAFVIMGGFHPTALPEEVLKHSCVDVV
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEE
VIGEGEETFRELVKNGPSRNVRGIAYRDNGGIVRTEPRPVITNIDTIPFPLRSLRPKRYG
EECCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHCCCCCCC
ETGDAYSIDTIYTSRGCPWSCSFCANDQMHKAWRGRSPENVVEEIALLHDPKNKKLIKIW
CCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEE
DANFLTNIGRAEKICDLLLEKGLTNFRIVTETRAKDIVRAERILGKLRQIGLSKAGLGIE
CCHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPNKETLALMNKQNSLNDVSKAIELCRKHGIGTEGYFIIGHYSEDMTATLAYPEFARSLG
CCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHHHH
LRQALFMVMTPYPGTAIFNEYKAEERIRSFDWDLYNNYCPVITTRHMNSDTLVAMLAYCN
HHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCHHHHHHHHHHH
VAFNGYRSVMKRNNMNALLLNFMVDLFQLTFLLRVNKNISEQAIIDLLFNALQLFLEEKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GIVLQTDMKYKKQLQHPLHLRLEHPSGKSIDFTLSEHNSRRELTMQHNTSNMVPLPVGSR
CEEEEECHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCHH
CIKLGTLVACACSISMDSLMTALYQNEWAHNNPKRITAPLLSLLTDRSLQHFGRNVALLY
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
LRVLLSGKK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]