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The map label for this gene is yajC [C]

Identifier: 78188091

GI number: 78188091

Start: 122786

End: 123142

Strand: Reverse

Name: yajC [C]

Synonym: Cag_0108

Alternate gene names: 78188091

Gene position: 123142-122786 (Counterclockwise)

Preceding gene: 78188092

Following gene: 78188090

Centisome position: 4.79

GC content: 44.26

Gene sequence:

>357_bases
ATGCAATCATTGATTCTTTCACTCTTACTATTTGCCCCACCCGCTGCCGGTCAAGGCAATCCAAATCCATTTATACAGCT
TGTTCCGCTTGTTCTTATTTTTGTTGTCTTTTACTTCTTTATGATTCGCCCTCAACAAAAAAAGCAGAAAGAGCGCGAAA
CAACACTTGACAGCTTAAAGCGGGGCGATCATGTAGTTACCATTGGTGGCGTGCATGGCACCGTGGCTGGCATTGATACC
GAAAAGAAAACCGTGTTAGTGCAGGTAAGCGACAACACAAAAATTAAGTTCGACCGCACAGCCATTGCAACTATTGATAA
ACAGGAAACGGGCGATAAATTGCCCGGCAAGGAGTAA

Upstream 100 bases:

>100_bases
AGATGCCATATAAATAACTTATATTCGGGCGCTCTTCTGCTCCGCTACACTAACTTAGCAGGTAGCAGCTCTTGCAATCC
AATTCTACCCAACATCCCTC

Downstream 100 bases:

>100_bases
CAGACTATTATGCAGCCAACACGCGCAAAACTGCTTTTAGAAAATGGCTCACTGTATAGCGGTACGCTTTTTGGGCACAT
TGGCGAAGCTATCGGTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MQSLILSLLLFAPPAAGQGNPNPFIQLVPLVLIFVVFYFFMIRPQQKKQKERETTLDSLKRGDHVVTIGGVHGTVAGIDT
EKKTVLVQVSDNTKIKFDRTAIATIDKQETGDKLPGKE

Sequences:

>Translated_118_residues
MQSLILSLLLFAPPAAGQGNPNPFIQLVPLVLIFVVFYFFMIRPQQKKQKERETTLDSLKRGDHVVTIGGVHGTVAGIDT
EKKTVLVQVSDNTKIKFDRTAIATIDKQETGDKLPGKE
>Mature_118_residues
MQSLILSLLLFAPPAAGQGNPNPFIQLVPLVLIFVVFYFFMIRPQQKKQKERETTLDSLKRGDHVVTIGGVHGTVAGIDT
EKKTVLVQVSDNTKIKFDRTAIATIDKQETGDKLPGKE

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=104, Percent_Identity=33.6538461538462, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13047; Mature: 13047

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLILSLLLFAPPAAGQGNPNPFIQLVPLVLIFVVFYFFMIRPQQKKQKERETTLDSLK
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RGDHVVTIGGVHGTVAGIDTEKKTVLVQVSDNTKIKFDRTAIATIDKQETGDKLPGKE
CCCEEEEEECCCCEEECCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MQSLILSLLLFAPPAAGQGNPNPFIQLVPLVLIFVVFYFFMIRPQQKKQKERETTLDSLK
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RGDHVVTIGGVHGTVAGIDTEKKTVLVQVSDNTKIKFDRTAIATIDKQETGDKLPGKE
CCCEEEEEECCCCEEECCCCCCEEEEEEECCCCEEEECCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]