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The map label for this gene is yecS [C]

Identifier: 78067959

GI number: 78067959

Start: 3659285

End: 3659965

Strand: Reverse

Name: yecS [C]

Synonym: Bcep18194_A6490

Alternate gene names: 78067959

Gene position: 3659965-3659285 (Counterclockwise)

Preceding gene: 78067960

Following gene: 78067958

Centisome position: 99.08

GC content: 66.96

Gene sequence:

>681_bases
ATGCCGGCCTGGCTTCACCTGATGGCGGAATCGCTGCGGCCCCTGCTGGTTGCGGGGCTCGTGTTCACGGTGCCGCTCAC
GCTCGCGTCGTTCGCGATCGGCCTGCTGCTCGCATTCGGCGCAGCGCTCACGAGGCTGTTCGGGCCGCGTTGGGCGCAGG
CCGCCGTGCGTTTCTACATCTGGCTGTTTCGCGGTTCGCCGCTGCTCGTGCAACTGTTCGTGATCTTCTACGGCCTGCCG
AGCGTCGGCATCGTGCTCGATCCGCTGACGGCCGCGGTGATCGGCTTCTCGCTGAACGTCGGCGCGTACAACGCCGAGGT
GATCCGCGGCGTGATCGAATCGATTCCGAAGGGGCAGTGGGAGGCCGCGTACTCGATGGCGATGACGCGCCCGCAGGCGC
TGCGCCGCGCGATCCTGCCGCAGGCCGCGCGCGTCGCGCTGCCCGCACTGTCGAATTCGTTCATTTCGCTCGTGAAGGAC
ACGTCGCTCGCGGCCGTGCTGACCGTGCCGGAGATCTTCCAGGCCGCGCAGCGGATCGCAGCCGTGACCTACGAGCCGAT
GATTCTCTATACGGAAGCCGCGCTGATCTATCTGCTGCTCAGCTCGGTGCTGTCCACGCTGCAGCGTCGCCTCGAAATCC
GCTTCGGCCGCCATGCGCTGTTCCAGGCGGAGTTGCGATGA

Upstream 100 bases:

>100_bases
ACAAGGCGCTCGCGGACATCAAGGCGGACGGTACCTACGCGAAGATCTCGCACAAGTATTTCGGCCGCGACGTGTCGCAG
CCGTAACGCGAGGCTGAACG

Downstream 100 bases:

>100_bases
TCCGGCTCGAACGCATCGACAAATCGTTCGGCGCGCATCGCGTGTTGCACGGGATCGACCTCGCGCTGCAGCCCGGCAGC
GTGACGGCGCTGATCGGGCC

Product: amino acid ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYIWLFRGSPLLVQLFVIFYGLP
SVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKD
TSLAAVLTVPEIFQAAQRIAAVTYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHALFQAELR

Sequences:

>Translated_226_residues
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYIWLFRGSPLLVQLFVIFYGLP
SVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKD
TSLAAVLTVPEIFQAAQRIAAVTYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHALFQAELR
>Mature_225_residues
PAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYIWLFRGSPLLVQLFVIFYGLPS
VGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKDT
SLAAVLTVPEIFQAAQRIAAVTYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHALFQAELR

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=54.8837209302326, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1788645, Length=230, Percent_Identity=34.7826086956522, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=37.4384236453202, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=33.0143540669856, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=30.1369863013699, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=35.7487922705314, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1787087, Length=165, Percent_Identity=31.5151515151515, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=35.5140186915888, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=26.2910798122066, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994930, Length=141, Percent_Identity=34.7517730496454, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24768; Mature: 24637

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPSVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
EAAYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AVTYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHALFQAELR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
>Mature Secondary Structure 
PAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPSVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
EAAYSMAMTRPQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AVTYEPMILYTEAALIYLLLSSVLSTLQRRLEIRFGRHALFQAELR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]