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The map label for this gene is regB [H]

Identifier: 78067914

GI number: 78067914

Start: 3610596

End: 3612014

Strand: Reverse

Name: regB [H]

Synonym: Bcep18194_A6445

Alternate gene names: 78067914

Gene position: 3612014-3610596 (Counterclockwise)

Preceding gene: 78067923

Following gene: 78067913

Centisome position: 97.78

GC content: 71.04

Gene sequence:

>1419_bases
ATGCAACGAATTACCACCACCGGGCGCGTCAACCTCAGTCACCTGTTCTGGCTTCGCAATCTCGCGATCATCGGCCAGCT
GGTGACGATCGGCGTCGTGCAGACCTATTTCGGCGTGCATCTGCCGTTGCCGGCGATGCTGATGGTCATCGCGCTCGAAA
TCGTTTTCAACGCGCTGACCTGGGTGCGCGTGCTGCGCGCGCGGCCCGAAACCAATTTCGAGCTGCTCGGCCAACTGTGG
GTCGACCTCGGTGCGCTGTCCGCGCTGCTGTTCCTGTCGGGCGGCACGACCAACCCGTTCGTGTCGCTGTACCTGCCGTC
GCTCGCGATCGCCGCGGCCGTGCTGCCGTGGCACCTGATGATCTGGCTCGCGGCGTTCGCGGTCGCGTGCTACGCGGCGC
TCGGTTTCGACTCGGTGCCGCTCAACATGGACAATCCCGCGAACCTGTTCGACTACTACCGTACCGGGATGTGGGCGAAC
TTCATGGTCAGCGTCGGCCTGATCGCGTGGTTCGTCGCGCGCATGTCGAAGGCGCTGCGCCAGCGCGATTCCGCGCTCGG
CGAAGCGCAGCAGCACCTGCTGCGCGACGAGCGGGCGGTCGCGCTCGGCGTGCAGGCCGCCACCGTCGCGCACGAGATGG
GCACGCCGCTGTCGACGATCGCGATGCTCGCCGAAGAGCTGCGCGACGCCGCCCGCGACGATCCGGGGCTGGCCCGCTAC
GAGGCCGACCTGAAGGTGCTCGAGGAACAGATGACGCTCTGCACGTCGGCGCTCGCGCGTCTGCGCAGCCGTGCGAGCGC
GCCGGCGAGCCGCCAGCCGGTGGACGACTGGCTCGACACGTTCGTCGAGCACTGGCGCCTGCGGCATCCGCACGTCCAGT
TCGAATCGCTCGGCGCGCGCCCGGCGGGCGTCGCGCTCGACGACACGGTCGCGGCCGGCCAGATCCTGACGATCCTGCTC
GACAACGCCGCGCGCGCGAGCCCGCAGCGCGTGACGCTGGCCGCGAAGGTCGCGCACGCCGGCACGGCCGACGAAATCGA
ATTCGAGGTATGCGACGACGGGCCCGGCATTCCGGCCTCGTTGCGGGAATCGCTCGGCGCGATGCCGGTCGACAGCACGC
AGGGCGGGCACGGGGTCGGCCTGTATCTGGCGTTCAGCGCGGCCGCGCGGCTCGGCGGCGAGATCGAACTGTCCGATGTC
GTGCCGCGCGCGGCGGGCGGCAACGGGCGGGCCGGTAGTGCGGCGAATGGTCACGCCGCGGCAGGATCGGCACAGCGCGC
GGGCCAGCGCGTTGCCGAACGGACAACCGGCACGCCGGACGGCCGCCCGGCCGGTGCGACCGCCGCGCGCGGCACGCGGG
CCGTGCTGCGGCTGCCGGTCGTGCGCGTCGCGGCGTCGGCCGCCTCAACCAACACGTAG

Upstream 100 bases:

>100_bases
CCGGCTGACGGCATCGGCCGCGCACGCGGGGTATCCCGTTCGCCGCACGCCGATCCGGCCCCGCTAGAGGCGCCGCCCGC
TAAACGGGTAAACTGCTCGG

Downstream 100 bases:

>100_bases
ACGGAGAAACCACATGAGCGAGAATAATTTCCTGGTGATCGACGACAACGAGGTGTTCGCGGGCACGCTCGCGCGCGGCC
TCGAGCGCCGCGGTTACGCG

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWAN
FMVSVGLIAWFVARMSKALRQRDSALGEAQQHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMTLCTSALARLRSRASAPASRQPVDDWLDTFVEHWRLRHPHVQFESLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHAGTADEIEFEVCDDGPGIPASLRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
VPRAAGGNGRAGSAANGHAAAGSAQRAGQRVAERTTGTPDGRPAGATAARGTRAVLRLPVVRVAASAASTNT

Sequences:

>Translated_472_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWAN
FMVSVGLIAWFVARMSKALRQRDSALGEAQQHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMTLCTSALARLRSRASAPASRQPVDDWLDTFVEHWRLRHPHVQFESLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHAGTADEIEFEVCDDGPGIPASLRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
VPRAAGGNGRAGSAANGHAAAGSAQRAGQRVAERTTGTPDGRPAGATAARGTRAVLRLPVVRVAASAASTNT
>Mature_472_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWAN
FMVSVGLIAWFVARMSKALRQRDSALGEAQQHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMTLCTSALARLRSRASAPASRQPVDDWLDTFVEHWRLRHPHVQFESLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHAGTADEIEFEVCDDGPGIPASLRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
VPRAAGGNGRAGSAANGHAAAGSAQRAGQRVAERTTGTPDGRPAGATAARGTRAVLRLPVVRVAASAASTNT

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50217; Mature: 50217

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]