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The map label for this gene is regA [H]

Identifier: 78067913

GI number: 78067913

Start: 3610040

End: 3610582

Strand: Reverse

Name: regA [H]

Synonym: Bcep18194_A6444

Alternate gene names: 78067913

Gene position: 3610582-3610040 (Counterclockwise)

Preceding gene: 78067914

Following gene: 78067903

Centisome position: 97.74

GC content: 66.3

Gene sequence:

>543_bases
ATGAGCGAGAATAATTTCCTGGTGATCGACGACAACGAGGTGTTCGCGGGCACGCTCGCGCGCGGCCTCGAGCGCCGCGG
TTACGCGGTCCAGCAGGCGCACGACAAGGAATCGGCGCTGCGGCTCGCCGCGGGCGGCAAGTTCCAGTTCATCACCGTCG
ACCTGCATCTCGGCGAGGATTCGGGCCTGAGCCTGATCGCGCCGCTGTGCGACCTGCAGCCCGACGCGCGGATCCTGGTG
CTGACCGGTTACGCGAGCATCGCGACCGCCGTGCAGGCGGTGAAGGAAGGCGCCGACAACTATCTCGCGAAGCCCGCGAA
CGTCGAGTCGATCCTGGCCGCGCTGCAGACCAACGCGACCGAAGTGCAGGCCGACGAAGCGCTCGAGAATCCGGTCGTGC
TGTCGGTCGACCGGCTCGAATGGGAGCACATCCAGCGCGTGCTGGCCGAGAACAACAACAATATTTCGGCGACGGCGCGC
GCACTGAACATGCACCGCCGCACGCTGCAGCGCAAGCTCGCGAAGAAGCCGGTGCGGCAGTAA

Upstream 100 bases:

>100_bases
GGTGCGACCGCCGCGCGCGGCACGCGGGCCGTGCTGCGGCTGCCGGTCGTGCGCGTCGCGGCGTCGGCCGCCTCAACCAA
CACGTAGACGGAGAAACCAC

Downstream 100 bases:

>100_bases
GCGGGGCGCGTCAGCGGGGCGAGCTTGAGGTTCGCGACAGGCAGGCGACGATCTCGCGTTTCAGCAGGAGCGCGATGAGC
GCCGAGTAGATGAGGTTCGC

Product: two component Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSENNFLVIDDNEVFAGTLARGLERRGYAVQQAHDKESALRLAAGGKFQFITVDLHLGEDSGLSLIAPLCDLQPDARILV
LTGYASIATAVQAVKEGADNYLAKPANVESILAALQTNATEVQADEALENPVVLSVDRLEWEHIQRVLAENNNNISATAR
ALNMHRRTLQRKLAKKPVRQ

Sequences:

>Translated_180_residues
MSENNFLVIDDNEVFAGTLARGLERRGYAVQQAHDKESALRLAAGGKFQFITVDLHLGEDSGLSLIAPLCDLQPDARILV
LTGYASIATAVQAVKEGADNYLAKPANVESILAALQTNATEVQADEALENPVVLSVDRLEWEHIQRVLAENNNNISATAR
ALNMHRRTLQRKLAKKPVRQ
>Mature_179_residues
SENNFLVIDDNEVFAGTLARGLERRGYAVQQAHDKESALRLAAGGKFQFITVDLHLGEDSGLSLIAPLCDLQPDARILVL
TGYASIATAVQAVKEGADNYLAKPANVESILAALQTNATEVQADEALENPVVLSVDRLEWEHIQRVLAENNNNISATARA
LNMHRRTLQRKLAKKPVRQ

Specific function: Member of the two-component regulatory system regB/regA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in

COG id: COG4567

COG function: function code TK; Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=135, Percent_Identity=30.3703703703704, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR002197
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 19697; Mature: 19565

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENNFLVIDDNEVFAGTLARGLERRGYAVQQAHDKESALRLAAGGKFQFITVDLHLGED
CCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCHHHHEEEECCCEEEEEEEEEEECCC
SGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKEGADNYLAKPANVESILAALQTNAT
CCCEEEHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCH
EVQADEALENPVVLSVDRLEWEHIQRVLAENNNNISATARALNMHRRTLQRKLAKKPVRQ
HHHHHHHHCCCEEEEEHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SENNFLVIDDNEVFAGTLARGLERRGYAVQQAHDKESALRLAAGGKFQFITVDLHLGED
CCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCHHHHEEEECCCEEEEEEEEEEECCC
SGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKEGADNYLAKPANVESILAALQTNAT
CCCEEEHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCH
EVQADEALENPVVLSVDRLEWEHIQRVLAENNNNISATARALNMHRRTLQRKLAKKPVRQ
HHHHHHHHCCCEEEEEHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA