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The map label for this gene is fliS [H]

Identifier: 78067880

GI number: 78067880

Start: 3579251

End: 3579685

Strand: Reverse

Name: fliS [H]

Synonym: Bcep18194_A6411

Alternate gene names: 78067880

Gene position: 3579685-3579251 (Counterclockwise)

Preceding gene: 78067881

Following gene: 78067879

Centisome position: 96.9

GC content: 68.28

Gene sequence:

>435_bases
ATGTTTTCCCCAGGGCACGCTGGAGCCAGTGCGTACGCGCGTGTCGGCGTCGAGACGGGGGTGATGGGCGCCTCCCCGCA
CCGGTTGATCGCGATGCTGTACCAGGGCGCGCGGCAGGCGATTGCGCTGGCGCGCCTGCATTTGCAGCAGGGCAATGTGT
CCGCGCGCGGCGAAGCGATCGGCAAGGCGATCCGGATCGTCGACAGCGGGCTGAAGGCGTCGCTGAACCTCGACGCGGGC
GGCGAGATCGCCGAGCGGCTGGACGCGCTGTATGCGTATATCGGCCGGCGTCTGCTCGAAGCGAATGCTCAGGCGAGCGA
CGCGATGCTGGTCGAAGTCGACGGGCTGCTCGCGACGCTCGAGGAAGCATGGACGGGGATCGCCCCGGAAGTCGCGCGGA
TGGCCGCGCAACAGGCAGTGGAAGCATCACGATGA

Upstream 100 bases:

>100_bases
TAAAGCTTTCCAAATCCCTTCCGATAACTCCGGTGAAGGCCGCGTCGTGCGATGCACGGCCGCGGTTCCCGTATAGCCAA
GGCATAACAAGGAGAAGCGC

Downstream 100 bases:

>100_bases
ATCGCAAGGCCGAATACTTCGAACGTTACGAGGCGCTCGCCGCCGTGTCGGGCCGAATGCTGGGCGCCGCCCGCAGCGCC
GACTGGAGCGCGTTGCCGGG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFSPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIALARLHLQQGNVSARGEAIGKAIRIVDSGLKASLNLDAG
GEIAERLDALYAYIGRRLLEANAQASDAMLVEVDGLLATLEEAWTGIAPEVARMAAQQAVEASR

Sequences:

>Translated_144_residues
MFSPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIALARLHLQQGNVSARGEAIGKAIRIVDSGLKASLNLDAG
GEIAERLDALYAYIGRRLLEANAQASDAMLVEVDGLLATLEEAWTGIAPEVARMAAQQAVEASR
>Mature_144_residues
MFSPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIALARLHLQQGNVSARGEAIGKAIRIVDSGLKASLNLDAG
GEIAERLDALYAYIGRRLLEANAQASDAMLVEVDGLLATLEEAWTGIAPEVARMAAQQAVEASR

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=39.3162393162393, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15039; Mature: 15039

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIALARLHLQQGNVSARGEAI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GKAIRIVDSGLKASLNLDAGGEIAERLDALYAYIGRRLLEANAQASDAMLVEVDGLLATL
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
EEAWTGIAPEVARMAAQQAVEASR
HHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSPGHAGASAYARVGVETGVMGASPHRLIAMLYQGARQAIALARLHLQQGNVSARGEAI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GKAIRIVDSGLKASLNLDAGGEIAERLDALYAYIGRRLLEANAQASDAMLVEVDGLLATL
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
EEAWTGIAPEVARMAAQQAVEASR
HHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]