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The map label for this gene is ybhP [H]

Identifier: 78067868

GI number: 78067868

Start: 3567607

End: 3568422

Strand: Direct

Name: ybhP [H]

Synonym: Bcep18194_A6399

Alternate gene names: 78067868

Gene position: 3567607-3568422 (Clockwise)

Preceding gene: 78067867

Following gene: 78067869

Centisome position: 96.58

GC content: 71.69

Gene sequence:

>816_bases
ATGTCCGCCGACGCCCTGTCCCTGCCGTTCGCCGAACCGCACGCCGCCCCCGACGAACTCACCGCGGTGAGCTGGAACCT
GCACAAGGGCCGCTCGCCGCTCGGCTTCACCGCGTGGAACGCGATGCGCAACTGGATGCAGTCGACGCACGCCGACGTGT
ATTTCCTGCAGGAAGCGATGGCGCGCCGCATGCCGCGCCCCGTGCTCGCGCCCGGCTTCGGCGCGCCGATGGACGATGCG
GTCGACGACGTCTGGCACTGCCAGGCCACCGAGATCGCGCATGCCCTCGACTGGCAGATCGCGCTCGGGCCGAACGTGTT
CAAGCCGTCGTGGCGGCACGGCAATGCGATCCTGTCACCGCATCCGCTCGACCTCGGCGGCCGCTGGGACATCTCCGCGC
ACCGCTTCGAGCGGCGCGGGCTGCTGGTCGCGCGCGCGACGCTCGCGGGCGCCCGCCCGGTCACGCTGCTGTGCGCGCAC
CTCGCGCTCACGCGCGCCGCGCGGCTGCGCCAGATGCACTGGATCGCGCACTGGATCGTGCGCAACGCAGGCGACGGCCC
GCTGATGCTCGCCGGCGACTTCAACGACTGGCGCAACGATTCGGTCGCGCTGTTCGGCGAGATCGGGTTGTCCGAGGTCG
CGACGCTGCTCGGCGAATCGGGCCGCACATTCCCCGCGTTCTCGCCGGCGCTCGCGCTCGACAAGATGTTCGTGCGCGGG
CTGACGCCGCTCGAATGGCGCGCGCCGTCCGGCGAGGCCGCGTGGCTGTCGGACCACCTGCCGTACATCGCGCGCCTGCG
CCTCGATCCGCAATAA

Upstream 100 bases:

>100_bases
TGACGGTCGGCGGCGACGCGTGGACCGACTGGACGCTCGTCGAACAGCATCCGCACCTCGTGTACCGCGTGCGTGCGCAC
GTCGCGAAGGATTGAGCGTC

Downstream 100 bases:

>100_bases
CGTTCCCGATCCCGGCCGGATATCAACCGGATATCAACCGGATTGCGCGCCGCCAAAGCGCGGCCGCGCGGCGCGCGCTA
CATTAACGCCTTGCCCATTC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSADALSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPVLAPGFGAPMDDA
VDDVWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ

Sequences:

>Translated_271_residues
MSADALSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPVLAPGFGAPMDDA
VDDVWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
>Mature_270_residues
SADALSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAMARRMPRPVLAPGFGAPMDDAV
DDVWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHL
ALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGL
TPLEWRAPSGEAAWLSDHLPYIARLRLDPQ

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=275, Percent_Identity=30.9090909090909, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 30023; Mature: 29891

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADALSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPVLAPGFGAPMDDAVDDVWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
HCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
CCCCEEECCCCCCHHHHHCCCEEEEEEECCC
>Mature Secondary Structure 
SADALSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWNAMRNWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPVLAPGFGAPMDDAVDDVWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
HCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
CCCCEEECCCCCCHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]