| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067856
Identifier: 78067856
GI number: 78067856
Start: 3554581
End: 3555726
Strand: Reverse
Name: 78067856
Synonym: Bcep18194_A6387
Alternate gene names: NA
Gene position: 3555726-3554581 (Counterclockwise)
Preceding gene: 78067857
Following gene: 78067852
Centisome position: 96.25
GC content: 70.77
Gene sequence:
>1146_bases ATGCCTGAAGCGTTGGCGGCGCGCGCGTCCGGCGTGCGCCGTGCGGGGGCAAGCAGCGCGCGCGTGATGCGCGCGTACCG CTACGCGCGGCGCTGGAGCGTGCGTACCGTCACGGGCGCGGCGCTGGCCGGCGCGTGCGTGGCGGCCAGCCTCGTGGTTC CTGTCGAATCCGCGCGCGCCGAAGGGCGCGCGCCGGCCACTTCACCGATCCATCCGTCGCAAGTCCCGCCGCCCGGCATG AGCCTGCCGGGCTTTCACGCGCCCGCCGTGTCGGACGGCACGGTGTCGCGCGGCACCGTGCGCGTGCAGCCCGCGCGCAT GCCGTTCTACGTTGCAACCAAGGGCAAGGTCACGCTGTACGTGCTCGGCACGCTGCACACGGGCGACCCGTCCGATTACC CGAGCGCGCAGCCGTTCCGGCCGCGCATCCTCGCGGCGCTCGCCGCGTCGCCCACACTGGCGCTCGAGCTGTCGCCCGAC GACCTGCTCGAATCGCAGGACGACGTGTCGAAGTACGGCGTCTGCCGCTACCCGTGCCTGCAGCGCCTGCTGCCCGAGCC GCTGTGGCAGCGGCTCGCGGCGCGTCTGCGCGGTAACCCGGCCGCGCTCACCGAGATCCGCAAGATGCGGCCGTGGCTCG CGGCGCTCGTCGTCGAGACCTACGATTCGCTGTCGGCCGGCCTGCAGACCGAGTACGGCACCGAGGCGCAGCTACAGAAC GTGTTCCTGAAGAAGAAGGGCGGCCGCGTGATCGGGCTCGAGACGCTCGCCGAACAGATGCGCGCGTTCACCGGGCTGAC GCTCGCCGAGCAGCGCGAGATGCTCGCGCAGGACATGGTGCAGACCCCCGCGCAGAACGCCGACGACATCAAGGCGCTGC ACCGACTGTGGCGAATTGGCGACGCCGATGCGATCTCGGCATGGGCGGTCGCGAAGAGCGAACGACTCGCGCGTTCGAAG GCGCTGTCGGACGCGATCGACAACAAGATCGTGTACGAGCGCAACCGCCGCTTCGTTGCACGAATGACGGCAATCGCCGC GCCGAACCGGCCGCTGTTCGTCGCGATCGGCGCGCTGCACCTGGGTGGCCCGCGCGGCGTGCTCGAATTGTTGCGTCAAC AAGGTTACAGGGTCGACGCGAACTGA
Upstream 100 bases:
>100_bases CCGTATGCGGTCGAGCGCTGCCGGGCGGAGGAGCCGCAGCTGCGCGAGGTCGACGGCCGGCGCGTGGCCTGCCATCGGGC CGAGGAGGTAGGGGAGGCGA
Downstream 100 bases:
>100_bases TCGCCGTCACCTCGCCCGAACCGATCCTCCCCTGTTTGATTGACGTTGTGCGAGCGCCTTAAACGCCTGTATGGGCACGC GATTCGATAAGGAAAACCCT
Product: GumN family protein
Products: NA
Alternate protein names: GumN Protein; SLA2 Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPEALAARASGVRRAGASSARVMRAYRYARRWSVRTVTGAALAGACVAASLVVPVESARAEGRAPATSPIHPSQVPPPGM SLPGFHAPAVSDGTVSRGTVRVQPARMPFYVATKGKVTLYVLGTLHTGDPSDYPSAQPFRPRILAALAASPTLALELSPD DLLESQDDVSKYGVCRYPCLQRLLPEPLWQRLAARLRGNPAALTEIRKMRPWLAALVVETYDSLSAGLQTEYGTEAQLQN VFLKKKGGRVIGLETLAEQMRAFTGLTLAEQREMLAQDMVQTPAQNADDIKALHRLWRIGDADAISAWAVAKSERLARSK ALSDAIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPRGVLELLRQQGYRVDAN
Sequences:
>Translated_381_residues MPEALAARASGVRRAGASSARVMRAYRYARRWSVRTVTGAALAGACVAASLVVPVESARAEGRAPATSPIHPSQVPPPGM SLPGFHAPAVSDGTVSRGTVRVQPARMPFYVATKGKVTLYVLGTLHTGDPSDYPSAQPFRPRILAALAASPTLALELSPD DLLESQDDVSKYGVCRYPCLQRLLPEPLWQRLAARLRGNPAALTEIRKMRPWLAALVVETYDSLSAGLQTEYGTEAQLQN VFLKKKGGRVIGLETLAEQMRAFTGLTLAEQREMLAQDMVQTPAQNADDIKALHRLWRIGDADAISAWAVAKSERLARSK ALSDAIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPRGVLELLRQQGYRVDAN >Mature_380_residues PEALAARASGVRRAGASSARVMRAYRYARRWSVRTVTGAALAGACVAASLVVPVESARAEGRAPATSPIHPSQVPPPGMS LPGFHAPAVSDGTVSRGTVRVQPARMPFYVATKGKVTLYVLGTLHTGDPSDYPSAQPFRPRILAALAASPTLALELSPDD LLESQDDVSKYGVCRYPCLQRLLPEPLWQRLAARLRGNPAALTEIRKMRPWLAALVVETYDSLSAGLQTEYGTEAQLQNV FLKKKGGRVIGLETLAEQMRAFTGLTLAEQREMLAQDMVQTPAQNADDIKALHRLWRIGDADAISAWAVAKSERLARSKA LSDAIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPRGVLELLRQQGYRVDAN
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41276; Mature: 41145
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEALAARASGVRRAGASSARVMRAYRYARRWSVRTVTGAALAGACVAASLVVPVESARA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHEHHHHHC EGRAPATSPIHPSQVPPPGMSLPGFHAPAVSDGTVSRGTVRVQPARMPFYVATKGKVTLY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEEE VLGTLHTGDPSDYPSAQPFRPRILAALAASPTLALELSPDDLLESQDDVSKYGVCRYPCL EEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHCCCCHHHHH QRLLPEPLWQRLAARLRGNPAALTEIRKMRPWLAALVVETYDSLSAGLQTEYGTEAQLQN HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VFLKKKGGRVIGLETLAEQMRAFTGLTLAEQREMLAQDMVQTPAQNADDIKALHRLWRIG HHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC DADAISAWAVAKSERLARSKALSDAIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEE LGGPRGVLELLRQQGYRVDAN CCCHHHHHHHHHHCCCEECCC >Mature Secondary Structure PEALAARASGVRRAGASSARVMRAYRYARRWSVRTVTGAALAGACVAASLVVPVESARA CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHEHHHHHC EGRAPATSPIHPSQVPPPGMSLPGFHAPAVSDGTVSRGTVRVQPARMPFYVATKGKVTLY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEEE VLGTLHTGDPSDYPSAQPFRPRILAALAASPTLALELSPDDLLESQDDVSKYGVCRYPCL EEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHCCCCHHHHH QRLLPEPLWQRLAARLRGNPAALTEIRKMRPWLAALVVETYDSLSAGLQTEYGTEAQLQN HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VFLKKKGGRVIGLETLAEQMRAFTGLTLAEQREMLAQDMVQTPAQNADDIKALHRLWRIG HHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC DADAISAWAVAKSERLARSKALSDAIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEE LGGPRGVLELLRQQGYRVDAN CCCHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA